Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C9orf72Q96LT7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.96■□□□□ 0.95
C9orf72Q96LT7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
C9orf72Q96LT7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 EEF1DP3-203ENST00000566025 782 ntBASIC20.95■□□□□ 0.94
C9orf72Q96LT7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C9orf72Q96LT7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 AC053503.5-201ENST00000601508 636 ntBASIC20.94■□□□□ 0.94
C9orf72Q96LT7 AL137784.2-201ENST00000607332 1000 ntBASIC20.94■□□□□ 0.94
C9orf72Q96LT7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
C9orf72Q96LT7 AP004607.4-201ENST00000530158 1459 ntBASIC20.94■□□□□ 0.94
C9orf72Q96LT7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 AC092437.1-201ENST00000624794 1048 ntBASIC20.93■□□□□ 0.94
C9orf72Q96LT7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
C9orf72Q96LT7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.92■□□□□ 0.94
C9orf72Q96LT7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms