Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
ITCHQ96J02 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.41■□□□□ 0.7
ITCHQ96J02 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ITCHQ96J02 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.41■□□□□ 0.7
ITCHQ96J02 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
ITCHQ96J02 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.41■□□□□ 0.7
ITCHQ96J02 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.41■□□□□ 0.7
ITCHQ96J02 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.41■□□□□ 0.7
ITCHQ96J02 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ITCHQ96J02 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.4■□□□□ 0.7
ITCHQ96J02 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.4■□□□□ 0.7
ITCHQ96J02 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.4■□□□□ 0.7
ITCHQ96J02 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.4■□□□□ 0.7
ITCHQ96J02 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ITCHQ96J02 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
ITCHQ96J02 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ITCHQ96J02 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ITCHQ96J02 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITCHQ96J02 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITCHQ96J02 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ITCHQ96J02 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
ITCHQ96J02 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.39■□□□□ 0.69
ITCHQ96J02 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ITCHQ96J02 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ITCHQ96J02 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ITCHQ96J02 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ITCHQ96J02 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ITCHQ96J02 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
ITCHQ96J02 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.39■□□□□ 0.69
ITCHQ96J02 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.39■□□□□ 0.69
ITCHQ96J02 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.38■□□□□ 0.69
ITCHQ96J02 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
ITCHQ96J02 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 AC010141.2-201ENST00000452426 721 ntBASIC19.38■□□□□ 0.69
ITCHQ96J02 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
ITCHQ96J02 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.38■□□□□ 0.69
ITCHQ96J02 AC116050.2-201ENST00000612102 1779 ntBASIC19.38■□□□□ 0.69
ITCHQ96J02 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ITCHQ96J02 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ITCHQ96J02 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ITCHQ96J02 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ITCHQ96J02 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ITCHQ96J02 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.37■□□□□ 0.69
ITCHQ96J02 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.37■□□□□ 0.69
ITCHQ96J02 AC142381.2-201ENST00000566120 298 ntBASIC19.37■□□□□ 0.69
ITCHQ96J02 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.37■□□□□ 0.69
ITCHQ96J02 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ITCHQ96J02 MIR2861-201ENST00000636310 90 ntBASIC19.37■□□□□ 0.69
ITCHQ96J02 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
ITCHQ96J02 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.37■□□□□ 0.69
ITCHQ96J02 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.37■□□□□ 0.69
ITCHQ96J02 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ITCHQ96J02 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms