Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 RARRES2P11-201ENST00000635158 484 ntBASIC19.39■□□□□ 0.69
LRRC58Q96CX6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.39■□□□□ 0.69
LRRC58Q96CX6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.39■□□□□ 0.69
LRRC58Q96CX6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 MIR572-201ENST00000384983 95 ntBASIC19.38■□□□□ 0.69
LRRC58Q96CX6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 AC008175.2-201ENST00000612840 297 ntBASIC19.38■□□□□ 0.69
LRRC58Q96CX6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 MIR2861-201ENST00000636310 90 ntBASIC19.38■□□□□ 0.69
LRRC58Q96CX6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC58Q96CX6 AL158211.5-201ENST00000623583 2518 ntBASIC19.38■□□□□ 0.69
LRRC58Q96CX6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 AC019069.1-201ENST00000610008 1333 ntBASIC19.37■□□□□ 0.69
LRRC58Q96CX6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 AC018445.3-201ENST00000624177 1945 ntBASIC19.37■□□□□ 0.69
LRRC58Q96CX6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC58Q96CX6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 AC027682.1-201ENST00000562846 899 ntBASIC19.36■□□□□ 0.69
LRRC58Q96CX6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRRC58Q96CX6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRRC58Q96CX6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms