Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SMARCC1Q92922 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCC1Q92922 TMPOP1-202ENST00000424642 1267 ntBASIC26.3■■□□□ 1.8
SMARCC1Q92922 AL355355.2-201ENST00000442321 338 ntBASIC26.3■■□□□ 1.8
SMARCC1Q92922 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC26.3■■□□□ 1.8
SMARCC1Q92922 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC26.3■■□□□ 1.8
SMARCC1Q92922 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.3■■□□□ 1.8
SMARCC1Q92922 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.3■■□□□ 1.8
SMARCC1Q92922 AF186192.3-201ENST00000583427 947 ntBASIC26.3■■□□□ 1.8
SMARCC1Q92922 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SMARCC1Q92922 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCC1Q92922 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCC1Q92922 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMARCC1Q92922 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCC1Q92922 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 MMP23A-201ENST00000234610 1017 ntBASIC26.29■■□□□ 1.8
SMARCC1Q92922 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCC1Q92922 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCC1Q92922 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCC1Q92922 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCC1Q92922 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMARCC1Q92922 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SMARCC1Q92922 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.28■■□□□ 1.8
SMARCC1Q92922 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 AL353807.1-201ENST00000427475 662 ntBASIC26.28■■□□□ 1.8
SMARCC1Q92922 KRT16P5-201ENST00000455284 522 ntBASIC26.28■■□□□ 1.8
SMARCC1Q92922 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCC1Q92922 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.28■■□□□ 1.8
SMARCC1Q92922 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 AL445228.2-201ENST00000605589 952 ntBASIC26.28■■□□□ 1.8
SMARCC1Q92922 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.28■■□□□ 1.8
SMARCC1Q92922 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMARCC1Q92922 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.28■■□□□ 1.8
SMARCC1Q92922 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCC1Q92922 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCC1Q92922 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCC1Q92922 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCC1Q92922 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC26.27■■□□□ 1.8
SMARCC1Q92922 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC26.27■■□□□ 1.8
SMARCC1Q92922 RPS15-203ENST00000586096 570 ntTSL 2 BASIC26.27■■□□□ 1.8
SMARCC1Q92922 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC26.27■■□□□ 1.8
SMARCC1Q92922 HTR7P1-201ENST00000538670 1336 ntBASIC26.27■■□□□ 1.8
SMARCC1Q92922 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCC1Q92922 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMARCC1Q92922 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SMARCC1Q92922 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.26■■□□□ 1.79
SMARCC1Q92922 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.26■■□□□ 1.79
SMARCC1Q92922 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMARCC1Q92922 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCC1Q92922 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 RN7SL850P-201ENST00000579959 291 ntBASIC26.25■■□□□ 1.79
SMARCC1Q92922 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.25■■□□□ 1.79
SMARCC1Q92922 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCC1Q92922 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCC1Q92922 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCC1Q92922 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMARCC1Q92922 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC26.24■■□□□ 1.79
SMARCC1Q92922 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMARCC1Q92922 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms