Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPB3Q92617 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPB3Q92617 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NPIPB3Q92617 AC099778.1-201ENST00000568593 1911 ntBASIC16.08■□□□□ 0.16
NPIPB3Q92617 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.08■□□□□ 0.16
NPIPB3Q92617 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPB3Q92617 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPB3Q92617 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.08■□□□□ 0.16
NPIPB3Q92617 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 AC120498.10-201ENST00000621827 505 ntBASIC16.08■□□□□ 0.16
NPIPB3Q92617 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.08■□□□□ 0.16
NPIPB3Q92617 RARRES2P11-201ENST00000635158 484 ntBASIC16.08■□□□□ 0.16
NPIPB3Q92617 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NPIPB3Q92617 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
NPIPB3Q92617 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 AC142381.2-201ENST00000566120 298 ntBASIC16.07■□□□□ 0.16
NPIPB3Q92617 AC138907.5-202ENST00000569484 235 ntBASIC16.07■□□□□ 0.16
NPIPB3Q92617 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.07■□□□□ 0.16
NPIPB3Q92617 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPB3Q92617 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 KRT16P2-201ENST00000414673 1423 ntBASIC16.06■□□□□ 0.16
NPIPB3Q92617 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPB3Q92617 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPB3Q92617 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 AL139246.5-201ENST00000606645 996 ntBASIC16.05■□□□□ 0.16
NPIPB3Q92617 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB3Q92617 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPB3Q92617 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB3Q92617 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB3Q92617 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB3Q92617 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB3Q92617 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB3Q92617 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB3Q92617 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms