Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 MKRN4P-201ENST00000444706 1521 ntBASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHROOM3Q8TF72 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 AC142086.2-201ENST00000569753 217 ntBASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 AC069236.1-201ENST00000604339 616 ntBASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 GABARAPL3-202ENST00000624044 1851 ntBASIC20.86■□□□□ 0.93
SHROOM3Q8TF72 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 AC010980.2-201ENST00000587099 1412 ntBASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 FAM21FP-204ENST00000608637 956 ntBASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.85■□□□□ 0.93
SHROOM3Q8TF72 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHROOM3Q8TF72 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 PGM5P4-201ENST00000421970 445 ntBASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 AC098934.4-201ENST00000564127 592 ntBASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 LINC01521-201ENST00000504184 1943 ntBASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.83■□□□□ 0.93
SHROOM3Q8TF72 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 MCRIP2P1-201ENST00000394346 511 ntBASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 AC105020.6-201ENST00000621523 1217 ntBASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SHROOM3Q8TF72 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHROOM3Q8TF72 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.82■□□□□ 0.92
SHROOM3Q8TF72 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM3Q8TF72 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHROOM3Q8TF72 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHROOM3Q8TF72 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.82■□□□□ 0.92
SHROOM3Q8TF72 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms