Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PMFBP1Q8TBY8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 AC087499.1-201ENST00000418141 1075 ntBASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PMFBP1Q8TBY8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PMFBP1Q8TBY8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 AL355075.4-201ENST00000554988 638 ntBASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PMFBP1Q8TBY8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PMFBP1Q8TBY8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PMFBP1Q8TBY8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC28.2■■■□□ 2.11
PMFBP1Q8TBY8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC28.2■■■□□ 2.11
PMFBP1Q8TBY8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PMFBP1Q8TBY8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PMFBP1Q8TBY8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC28.19■■■□□ 2.1
PMFBP1Q8TBY8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 MIR4785-201ENST00000585005 73 ntBASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PMFBP1Q8TBY8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms