Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SIMC1Q8NDZ2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 FP700111.2-201ENST00000619190 1892 ntBASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 AC073111.5-205ENST00000641717 521 ntBASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SIMC1Q8NDZ2 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 AC068338.2-201ENST00000563278 1430 ntBASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 CDCA4P2-201ENST00000441182 718 ntBASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 AC013268.1-206ENST00000638368 961 ntBASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 AC112229.1-201ENST00000639295 961 ntBASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.19■□□□□ 0.66
SIMC1Q8NDZ2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 AC007225.1-201ENST00000566331 1836 ntBASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SIMC1Q8NDZ2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 AC073314.1-201ENST00000568729 2216 ntBASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 RAP2CP1-201ENST00000605103 478 ntBASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 FEM1AP1-201ENST00000431297 1995 ntBASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SIMC1Q8NDZ2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms