Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC010980.1-201ENST00000587192 1142 ntBASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 AC120498.9-201ENST00000339021 3867 ntBASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC197Q8NCU1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC197Q8NCU1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 AC093484.2-201ENST00000580996 2166 ntBASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 MIR4508-201ENST00000584178 70 ntBASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC197Q8NCU1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 AC011484.1-201ENST00000377652 1995 ntBASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC197Q8NCU1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC197Q8NCU1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 pRNA.6-201ENST00000610482 90 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 pRNA.5-201ENST00000612139 90 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 pRNA.11-201ENST00000618423 90 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 pRNA.13-201ENST00000619112 90 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 AC241377.3-202ENST00000626088 1088 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 AC241585.3-202ENST00000628937 1088 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 AC245100.8-202ENST00000629247 1058 ntBASIC20.21■□□□□ 0.83
CCDC197Q8NCU1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms