Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC71LQ8N9Z2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC71LQ8N9Z2 TCF3P1-201ENST00000423021 1937 ntBASIC16.96■□□□□ 0.3
CCDC71LQ8N9Z2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC71LQ8N9Z2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CCDC71LQ8N9Z2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
CCDC71LQ8N9Z2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 AC005224.4-201ENST00000583262 1652 ntBASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 BX842568.3-201ENST00000418104 571 ntBASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CCDC71LQ8N9Z2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 AC133561.4-201ENST00000566112 224 ntBASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC71LQ8N9Z2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC71LQ8N9Z2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 GUSBP5-201ENST00000418136 578 ntBASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC71LQ8N9Z2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC71LQ8N9Z2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms