Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SYNPOQ8N3V7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNPOQ8N3V7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SYNPOQ8N3V7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 MIR1224-201ENST00000408193 85 ntBASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 AC005829.2-201ENST00000571422 1056 ntBASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 AC110285.5-201ENST00000611501 352 ntBASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPOQ8N3V7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 AC239809.2-201ENST00000415381 517 ntBASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 AL049637.2-201ENST00000641778 930 ntBASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPOQ8N3V7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 MIR4785-201ENST00000585005 73 ntBASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 AL023875.1-201ENST00000640777 796 ntBASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPOQ8N3V7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 FAM99A-202ENST00000538190 1989 ntBASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 AC080038.3-201ENST00000623346 1952 ntBASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPOQ8N3V7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SYNPOQ8N3V7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms