Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AC007225.1-201ENST00000566331 1836 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AC090340.1-201ENST00000620778 4980 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 KRT16P2-201ENST00000414673 1423 ntBASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 AC138907.5-202ENST00000569484 235 ntBASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 AP005212.1-201ENST00000581547 1997 ntBASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MRPL55Q7Z7F7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MRPL55Q7Z7F7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.08□□□□□ -0.31
MRPL55Q7Z7F7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 FP700111.2-201ENST00000619190 1892 ntBASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC13.08□□□□□ -0.32
MRPL55Q7Z7F7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 AC073314.1-201ENST00000568729 2216 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L2-201ENST00000561772 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L6-201ENST00000626483 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L1-201ENST00000627662 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L8-201ENST00000629013 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L3-201ENST00000630187 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L7-201ENST00000630678 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DUX4L5-201ENST00000630834 1275 ntBASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
MRPL55Q7Z7F7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms