Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 RBM17P1-201ENST00000453646 1190 ntBASIC14.32□□□□□ -0.12
CSMD3Q7Z407 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.32□□□□□ -0.12
CSMD3Q7Z407 AC080038.3-201ENST00000623346 1952 ntBASIC14.32□□□□□ -0.12
CSMD3Q7Z407 MMP23A-201ENST00000234610 1017 ntBASIC14.31□□□□□ -0.12
CSMD3Q7Z407 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 KRT18P22-201ENST00000402024 1347 ntBASIC14.31□□□□□ -0.12
CSMD3Q7Z407 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 CASK-201ENST00000378154 2494 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CSMD3Q7Z407 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 AC006011.2-201ENST00000621313 1158 ntBASIC14.3□□□□□ -0.12
CSMD3Q7Z407 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 AL590326.2-201ENST00000625139 305 ntBASIC14.3□□□□□ -0.12
CSMD3Q7Z407 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 CYP21A1P-202ENST00000354927 1481 ntBASIC14.3□□□□□ -0.12
CSMD3Q7Z407 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CSMD3Q7Z407 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.29□□□□□ -0.12
CSMD3Q7Z407 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.29□□□□□ -0.12
CSMD3Q7Z407 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.29□□□□□ -0.12
CSMD3Q7Z407 SLC25A3P1-201ENST00000443844 931 ntBASIC14.29□□□□□ -0.12
CSMD3Q7Z407 MYC-208ENST00000641036 567 ntBASIC14.29□□□□□ -0.12
CSMD3Q7Z407 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms