Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 AC018445.3-201ENST00000624177 1945 ntBASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 AC007225.1-201ENST00000566331 1836 ntBASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.5■□□□□ 0.71
PPP4R4Q6NUP7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 AL358852.1-201ENST00000623174 1268 ntBASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PPP4R4Q6NUP7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 AL354811.1-201ENST00000610286 706 ntBASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PPP4R4Q6NUP7 AL512408.1-201ENST00000569378 2000 ntBASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PPP4R4Q6NUP7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 AC121338.2-201ENST00000622535 1744 ntBASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PPP4R4Q6NUP7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 AC099778.1-201ENST00000568593 1911 ntBASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.45■□□□□ 0.7
PPP4R4Q6NUP7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms