Protein–RNA interactions for Protein: Q6NTF9

RHBDD2, Rhomboid domain-containing protein 2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD2Q6NTF9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RHBDD2Q6NTF9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 LINC00565-201ENST00000562710 2331 ntBASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 KRT17P3-201ENST00000420566 1262 ntBASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 GCSHP5-201ENST00000443090 522 ntBASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 KRT8P36-201ENST00000489121 1440 ntBASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RHBDD2Q6NTF9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 AC005829.2-201ENST00000571422 1056 ntBASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 AC079834.2-201ENST00000609776 1949 ntBASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RHBDD2Q6NTF9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RHBDD2Q6NTF9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 RPS2P52-201ENST00000469610 820 ntBASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.19■□□□□ 0.66
RHBDD2Q6NTF9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms