Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.65■■□□□ 1.38
KRT40Q6A162 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT40Q6A162 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
KRT40Q6A162 AC020907.5-201ENST00000624372 1936 ntBASIC23.65■■□□□ 1.38
KRT40Q6A162 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.64■■□□□ 1.38
KRT40Q6A162 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KRT40Q6A162 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KRT40Q6A162 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.64■■□□□ 1.37
KRT40Q6A162 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.64■■□□□ 1.37
KRT40Q6A162 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.64■■□□□ 1.37
KRT40Q6A162 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KRT40Q6A162 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.64■■□□□ 1.37
KRT40Q6A162 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.64■■□□□ 1.37
KRT40Q6A162 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.64■■□□□ 1.37
KRT40Q6A162 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KRT40Q6A162 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.63■■□□□ 1.37
KRT40Q6A162 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
KRT40Q6A162 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
KRT40Q6A162 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.63■■□□□ 1.37
KRT40Q6A162 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
KRT40Q6A162 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
KRT40Q6A162 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.62■■□□□ 1.37
KRT40Q6A162 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
KRT40Q6A162 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.62■■□□□ 1.37
KRT40Q6A162 CDV3P1-201ENST00000471403 739 ntBASIC23.62■■□□□ 1.37
KRT40Q6A162 AC083906.2-201ENST00000511578 360 ntBASIC23.62■■□□□ 1.37
KRT40Q6A162 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.62■■□□□ 1.37
KRT40Q6A162 DUX4L16-201ENST00000555130 1264 ntBASIC23.62■■□□□ 1.37
KRT40Q6A162 AL138781.1-201ENST00000566567 1274 ntBASIC23.62■■□□□ 1.37
KRT40Q6A162 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.62■■□□□ 1.37
KRT40Q6A162 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
KRT40Q6A162 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
KRT40Q6A162 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.62■■□□□ 1.37
KRT40Q6A162 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
KRT40Q6A162 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.61■■□□□ 1.37
KRT40Q6A162 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.61■■□□□ 1.37
KRT40Q6A162 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 AL591742.1-201ENST00000604433 565 ntBASIC23.61■■□□□ 1.37
KRT40Q6A162 AC013268.1-206ENST00000638368 961 ntBASIC23.61■■□□□ 1.37
KRT40Q6A162 AC112229.1-201ENST00000639295 961 ntBASIC23.61■■□□□ 1.37
KRT40Q6A162 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
KRT40Q6A162 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
KRT40Q6A162 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
KRT40Q6A162 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
KRT40Q6A162 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.6■■□□□ 1.37
KRT40Q6A162 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
KRT40Q6A162 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
KRT40Q6A162 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
KRT40Q6A162 CNN2P6-201ENST00000439038 900 ntBASIC23.6■■□□□ 1.37
KRT40Q6A162 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.6■■□□□ 1.37
KRT40Q6A162 TSPY6P-201ENST00000448518 926 ntBASIC23.6■■□□□ 1.37
KRT40Q6A162 AC007322.4-201ENST00000509611 723 ntBASIC23.6■■□□□ 1.37
KRT40Q6A162 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.6■■□□□ 1.37
KRT40Q6A162 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.6■■□□□ 1.37
KRT40Q6A162 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.6■■□□□ 1.37
KRT40Q6A162 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.6■■□□□ 1.37
KRT40Q6A162 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KRT40Q6A162 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.6■■□□□ 1.37
KRT40Q6A162 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.59■■□□□ 1.37
KRT40Q6A162 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
KRT40Q6A162 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 GUSBP6-202ENST00000438529 1198 ntBASIC23.59■■□□□ 1.37
KRT40Q6A162 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.59■■□□□ 1.37
KRT40Q6A162 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KRT40Q6A162 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms