Protein–RNA interactions for Protein: Q5EBM4

ZNF542P, Putative zinc finger protein 542, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542PQ5EBM4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF542PQ5EBM4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 POM121L13P-201ENST00000422362 380 ntBASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF542PQ5EBM4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 PGM5P4-201ENST00000421970 445 ntBASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF542PQ5EBM4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF542PQ5EBM4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ZNF542PQ5EBM4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF542PQ5EBM4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 AL024507.2-201ENST00000606070 2574 ntBASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF542PQ5EBM4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20■□□□□ 0.79
ZNF542PQ5EBM4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ZNF542PQ5EBM4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF542PQ5EBM4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms