Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KHDC1Q4VXA5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 TERF1P5-201ENST00000477545 1207 ntBASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 AC090192.1-201ENST00000517740 490 ntBASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
KHDC1Q4VXA5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
KHDC1Q4VXA5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KHDC1Q4VXA5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 AC087289.5-201ENST00000586076 3175 ntBASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KHDC1Q4VXA5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 AC026185.1-201ENST00000445748 174 ntBASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 AC243732.1-201ENST00000612648 864 ntBASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.58■□□□□ 0.89
KHDC1Q4VXA5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms