Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TRIM60Q495X7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM60Q495X7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM60Q495X7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM60Q495X7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 AC080038.3-201ENST00000623346 1952 ntBASIC22.56■■□□□ 1.2
TRIM60Q495X7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM60Q495X7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM60Q495X7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 AC005521.1-201ENST00000393351 872 ntBASIC22.56■■□□□ 1.2
TRIM60Q495X7 PGM5P4-201ENST00000421970 445 ntBASIC22.56■■□□□ 1.2
TRIM60Q495X7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
TRIM60Q495X7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM60Q495X7 KRT8P9-201ENST00000558927 1449 ntBASIC22.56■■□□□ 1.2
TRIM60Q495X7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TRIM60Q495X7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM60Q495X7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM60Q495X7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM60Q495X7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM60Q495X7 AL356652.1-201ENST00000615962 565 ntBASIC22.55■■□□□ 1.2
TRIM60Q495X7 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.55■■□□□ 1.2
TRIM60Q495X7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM60Q495X7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM60Q495X7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM60Q495X7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM60Q495X7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM60Q495X7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM60Q495X7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.54■■□□□ 1.2
TRIM60Q495X7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 FAM99A-202ENST00000538190 1989 ntBASIC22.54■■□□□ 1.2
TRIM60Q495X7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM60Q495X7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.54■■□□□ 1.2
TRIM60Q495X7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.54■■□□□ 1.2
TRIM60Q495X7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TRIM60Q495X7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
TRIM60Q495X7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TRIM60Q495X7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
TRIM60Q495X7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM60Q495X7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM60Q495X7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM60Q495X7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.53■■□□□ 1.2
TRIM60Q495X7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.53■■□□□ 1.2
TRIM60Q495X7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TRIM60Q495X7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 RBM17P1-201ENST00000453646 1190 ntBASIC22.52■■□□□ 1.2
TRIM60Q495X7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TRIM60Q495X7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRIM60Q495X7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.52■■□□□ 1.19
TRIM60Q495X7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM60Q495X7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM60Q495X7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM60Q495X7 AL353807.1-201ENST00000427475 662 ntBASIC22.51■■□□□ 1.19
TRIM60Q495X7 KRT18P57-201ENST00000443599 1254 ntBASIC22.51■■□□□ 1.19
TRIM60Q495X7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 KRT16P5-201ENST00000455284 522 ntBASIC22.51■■□□□ 1.19
TRIM60Q495X7 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM60Q495X7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
TRIM60Q495X7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM60Q495X7 AC079598.2-202ENST00000546624 1451 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms