Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 NOP53YPL146C 1368 nt1.13□□□□□ -2.23
HRD1Q08109 RPS26BYER131W 360 nt1.13□□□□□ -2.23
HRD1Q08109 HTD2YHR067W 843 nt1.13□□□□□ -2.23
HRD1Q08109 SDL1YIL167W 633 nt1.13□□□□□ -2.23
HRD1Q08109 RAM2YKL019W 951 nt1.13□□□□□ -2.23
HRD1Q08109 YLR458WYLR458W 381 nt1.13□□□□□ -2.23
HRD1Q08109 YBR062CYBR062C 543 nt1.13□□□□□ -2.23
HRD1Q08109 HMI1YOL095C 2121 nt1.13□□□□□ -2.23
HRD1Q08109 ASM4YDL088C 1587 nt1.13□□□□□ -2.23
HRD1Q08109 YSW1YBR148W 1830 nt1.12□□□□□ -2.23
HRD1Q08109 COX6YHR051W 447 nt1.12□□□□□ -2.23
HRD1Q08109 HYR1YIR037W 492 nt1.12□□□□□ -2.23
HRD1Q08109 CYB5YNL111C 363 nt1.12□□□□□ -2.23
HRD1Q08109 FYV6YNL133C 522 nt1.12□□□□□ -2.23
HRD1Q08109 PEX27YOR193W 1131 nt1.12□□□□□ -2.23
HRD1Q08109 TYE7YOR344C 876 nt1.12□□□□□ -2.23
HRD1Q08109 snR44snR44 211 nt1.12□□□□□ -2.23
HRD1Q08109 KIP1YBL063W 3336 nt1.12□□□□□ -2.23
HRD1Q08109 KAP122YGL016W 3246 nt1.12□□□□□ -2.23
HRD1Q08109 NCL1YBL024W 2055 nt1.12□□□□□ -2.23
HRD1Q08109 YNL284C-BYNL284C-B 5268 nt1.12□□□□□ -2.23
HRD1Q08109 YGL204CYGL204C 306 nt1.11□□□□□ -2.23
HRD1Q08109 YIP1YGR172C 747 nt1.11□□□□□ -2.23
HRD1Q08109 YLR255CYLR255C 354 nt1.11□□□□□ -2.23
HRD1Q08109 CMC2YBL059C-A 330 nt1.11□□□□□ -2.23
HRD1Q08109 YOR366WYOR366W 354 nt1.11□□□□□ -2.23
HRD1Q08109 VID24YBR105C 1089 nt1.11□□□□□ -2.23
HRD1Q08109 MLH3YPL164C 2148 nt1.1□□□□□ -2.23
HRD1Q08109 YDL025W-AYDL025W-A 105 nt1.1□□□□□ -2.23
HRD1Q08109 YDR537CYDR537C 606 nt1.1□□□□□ -2.23
HRD1Q08109 PRS3YHL011C 963 nt1.1□□□□□ -2.23
HRD1Q08109 YLR307C-AYLR307C-A 264 nt1.1□□□□□ -2.23
HRD1Q08109 RPN8YOR261C 1017 nt1.1□□□□□ -2.23
HRD1Q08109 YOR394C-AYOR394C-A 168 nt1.1□□□□□ -2.23
HRD1Q08109 IRE1YHR079C 3348 nt1.1□□□□□ -2.23
HRD1Q08109 CDC25YLR310C 4770 nt1.09□□□□□ -2.23
HRD1Q08109 SMC4YLR086W 4257 nt1.09□□□□□ -2.23
HRD1Q08109 YGR283CYGR283C 1026 nt1.09□□□□□ -2.23
HRD1Q08109 EST3YIL009C-A 546 nt1.09□□□□□ -2.23
HRD1Q08109 YJR023CYJR023C 402 nt1.09□□□□□ -2.23
HRD1Q08109 HSK3YKL138C-A 210 nt1.09□□□□□ -2.23
HRD1Q08109 ATP18YML081C-A 180 nt1.09□□□□□ -2.23
HRD1Q08109 ERG29YMR134W 714 nt1.09□□□□□ -2.23
HRD1Q08109 SFG1YOR315W 1041 nt1.09□□□□□ -2.23
HRD1Q08109 MSH5YDL154W 2706 nt1.09□□□□□ -2.24
HRD1Q08109 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
HRD1Q08109 LST4YKL176C 2487 nt1.08□□□□□ -2.24
HRD1Q08109 BNA7YDR428C 786 nt1.08□□□□□ -2.24
HRD1Q08109 YJL156W-AYJL156W-A 222 nt1.08□□□□□ -2.24
HRD1Q08109 YSY6YBR162W-A 198 nt1.08□□□□□ -2.24
HRD1Q08109 YGL014C-AYGL014C-A 162 nt1.07□□□□□ -2.24
HRD1Q08109 YGR242WYGR242W 309 nt1.07□□□□□ -2.24
HRD1Q08109 ARG3YJL088W 1017 nt1.07□□□□□ -2.24
HRD1Q08109 GRX8YLR364W 330 nt1.07□□□□□ -2.24
HRD1Q08109 RIO2YNL207W 1278 nt1.07□□□□□ -2.24
HRD1Q08109 UFE1YOR075W 1041 nt1.07□□□□□ -2.24
HRD1Q08109 GAL7YBR018C 1101 nt1.07□□□□□ -2.24
HRD1Q08109 VMR1YHL035C 4779 nt1.07□□□□□ -2.24
HRD1Q08109 YHL037CYHL037C 402 nt1.06□□□□□ -2.24
HRD1Q08109 CIC1YHR052W 1131 nt1.06□□□□□ -2.24
HRD1Q08109 DIA1YMR316W 1011 nt1.06□□□□□ -2.24
HRD1Q08109 YNR068CYNR068C 819 nt1.06□□□□□ -2.24
HRD1Q08109 YOL150CYOL150C 312 nt1.06□□□□□ -2.24
HRD1Q08109 APL1YJR005W 2103 nt1.06□□□□□ -2.24
HRD1Q08109 SHS1YDL225W 1656 nt1.05□□□□□ -2.24
HRD1Q08109 RUB1YDR139C 234 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)E1tH(GUG)E1 72 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)E2tH(GUG)E2 72 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)G1tH(GUG)G1 72 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)G2tH(GUG)G2 72 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)HtH(GUG)H 72 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)KtH(GUG)K 72 nt1.05□□□□□ -2.24
HRD1Q08109 tH(GUG)MtH(GUG)M 72 nt1.05□□□□□ -2.24
HRD1Q08109 YHL002C-AYHL002C-A 489 nt1.05□□□□□ -2.24
HRD1Q08109 YJL127C-BYJL127C-B 159 nt1.05□□□□□ -2.24
HRD1Q08109 YET1YKL065C 621 nt1.05□□□□□ -2.24
HRD1Q08109 FCF2YLR051C 654 nt1.05□□□□□ -2.24
HRD1Q08109 RRT15YLR162W-A 189 nt1.05□□□□□ -2.24
HRD1Q08109 YDR210W-AYDR210W-A 1317 nt1.05□□□□□ -2.24
HRD1Q08109 YOR343W-AYOR343W-A 1317 nt1.05□□□□□ -2.24
HRD1Q08109 EST2YLR318W 2655 nt1.05□□□□□ -2.24
HRD1Q08109 NST1YNL091W 3723 nt1.05□□□□□ -2.24
HRD1Q08109 NCA2YPR155C 1851 nt1.05□□□□□ -2.24
HRD1Q08109 VAM6YDL077C 3150 nt1.04□□□□□ -2.24
HRD1Q08109 TSA2YDR453C 591 nt1.04□□□□□ -2.24
HRD1Q08109 GPN3YLR243W 819 nt1.04□□□□□ -2.24
HRD1Q08109 TAP42YMR028W 1101 nt1.04□□□□□ -2.24
HRD1Q08109 RPL33BYOR234C 324 nt1.04□□□□□ -2.24
HRD1Q08109 MGR1YCL044C 1254 nt1.04□□□□□ -2.24
HRD1Q08109 MDS3YGL197W 4464 nt1.04□□□□□ -2.24
HRD1Q08109 SPO75YLL005C 2607 nt1.03□□□□□ -2.24
HRD1Q08109 YJR098CYJR098C 1971 nt1.03□□□□□ -2.24
HRD1Q08109 DOT6YER088C 2013 nt1.03□□□□□ -2.24
HRD1Q08109 ALK1YGL021W 2283 nt1.03□□□□□ -2.24
HRD1Q08109 SEC28YIL076W 891 nt1.03□□□□□ -2.24
HRD1Q08109 YNL226WYNL226W 411 nt1.03□□□□□ -2.24
HRD1Q08109 PET123YOR158W 957 nt1.03□□□□□ -2.24
HRD1Q08109 YOR169CYOR169C 465 nt1.03□□□□□ -2.24
HRD1Q08109 DAS1YJL149W 1992 nt1.03□□□□□ -2.25
HRD1Q08109 SLU7YDR088C 1149 nt1.02□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 20.8 ms