Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 INP53YOR109W 3324 nt2.43□□□□□ -2.02
VPS38Q05919 YLR171WYLR171W 390 nt2.43□□□□□ -2.02
VPS38Q05919 DDR48YMR173W 1293 nt2.43□□□□□ -2.02
VPS38Q05919 HSC82YMR186W 2118 nt2.43□□□□□ -2.02
VPS38Q05919 ICY1YMR195W 384 nt2.43□□□□□ -2.02
VPS38Q05919 IGO1YNL157W 507 nt2.43□□□□□ -2.02
VPS38Q05919 DGK1YOR311C 873 nt2.43□□□□□ -2.02
VPS38Q05919 CLN3YAL040C 1743 nt2.42□□□□□ -2.02
VPS38Q05919 VPS16YPL045W 2397 nt2.42□□□□□ -2.02
VPS38Q05919 SKP2YNL311C 2292 nt2.42□□□□□ -2.02
VPS38Q05919 SMB1YER029C 591 nt2.42□□□□□ -2.02
VPS38Q05919 BI2Q0110 1272 nt2.42□□□□□ -2.02
VPS38Q05919 RPI1YIL119C 1224 nt2.42□□□□□ -2.02
VPS38Q05919 YJR079WYJR079W 330 nt2.42□□□□□ -2.02
VPS38Q05919 TIM8YJR135W-A 264 nt2.42□□□□□ -2.02
VPS38Q05919 YLR379WYLR379W 375 nt2.42□□□□□ -2.02
VPS38Q05919 NOP15YNL110C 663 nt2.42□□□□□ -2.02
VPS38Q05919 YPL205CYPL205C 345 nt2.42□□□□□ -2.02
VPS38Q05919 TAE2YPL009C 3117 nt2.42□□□□□ -2.02
VPS38Q05919 YNL018CYNL018C 1839 nt2.42□□□□□ -2.02
VPS38Q05919 SNU114YKL173W 3027 nt2.42□□□□□ -2.02
VPS38Q05919 UFD4YKL010C 4452 nt2.41□□□□□ -2.02
VPS38Q05919 SDC1YDR469W 528 nt2.41□□□□□ -2.02
VPS38Q05919 YJR140W-AYJR140W-A 150 nt2.41□□□□□ -2.02
VPS38Q05919 LCL2YLR104W 396 nt2.41□□□□□ -2.02
VPS38Q05919 RMP1YLR145W 606 nt2.41□□□□□ -2.02
VPS38Q05919 snR43snR43 209 nt2.41□□□□□ -2.02
VPS38Q05919 YFR016CYFR016C 3702 nt2.41□□□□□ -2.02
VPS38Q05919 YBR012W-AYBR012W-A 1323 nt2.41□□□□□ -2.02
VPS38Q05919 YOR142W-AYOR142W-A 1323 nt2.41□□□□□ -2.02
VPS38Q05919 YPR158W-AYPR158W-A 1323 nt2.41□□□□□ -2.02
VPS38Q05919 SWA2YDR320C 2007 nt2.41□□□□□ -2.02
VPS38Q05919 YPK1YKL126W 2043 nt2.41□□□□□ -2.02
VPS38Q05919 PRK1YIL095W 2433 nt2.4□□□□□ -2.02
VPS38Q05919 YJL052C-AYJL052C-A 120 nt2.4□□□□□ -2.03
VPS38Q05919 RUF22RUF22 515 nt2.4□□□□□ -2.03
VPS38Q05919 ATP3YBR039W 936 nt2.4□□□□□ -2.03
VPS38Q05919 CBF2YGR140W 2871 nt2.4□□□□□ -2.03
VPS38Q05919 SAP190YKR028W 3102 nt2.39□□□□□ -2.03
VPS38Q05919 snR70snR70 164 nt2.39□□□□□ -2.03
VPS38Q05919 YJR157WYJR157W 363 nt2.39□□□□□ -2.03
VPS38Q05919 CCW14YLR390W-A 717 nt2.39□□□□□ -2.03
VPS38Q05919 ATP15YPL271W 189 nt2.39□□□□□ -2.03
VPS38Q05919 VMA9YCL005W-A 222 nt2.39□□□□□ -2.03
VPS38Q05919 TRS130YMR218C 3309 nt2.39□□□□□ -2.03
VPS38Q05919 SCP160YJL080C 3669 nt2.39□□□□□ -2.03
VPS38Q05919 YEL043WYEL043W 2871 nt2.39□□□□□ -2.03
VPS38Q05919 UBP11YKR098C 2154 nt2.39□□□□□ -2.03
VPS38Q05919 CAJ1YER048C 1176 nt2.38□□□□□ -2.03
VPS38Q05919 YFR056CYFR056C 369 nt2.38□□□□□ -2.03
VPS38Q05919 YKL111CYKL111C 336 nt2.38□□□□□ -2.03
VPS38Q05919 SIP18YMR175W 240 nt2.38□□□□□ -2.03
VPS38Q05919 PTC5YOR090C 1719 nt2.38□□□□□ -2.03
VPS38Q05919 YBR277CYBR277C 402 nt2.38□□□□□ -2.03
VPS38Q05919 INO80YGL150C 4470 nt2.38□□□□□ -2.03
VPS38Q05919 YDR186CYDR186C 2634 nt2.37□□□□□ -2.03
VPS38Q05919 YDL068WYDL068W 330 nt2.37□□□□□ -2.03
VPS38Q05919 TWF1YGR080W 999 nt2.37□□□□□ -2.03
VPS38Q05919 ECL1YGR146C 636 nt2.37□□□□□ -2.03
VPS38Q05919 PSY1YKL076C 384 nt2.37□□□□□ -2.03
VPS38Q05919 YML108WYML108W 318 nt2.37□□□□□ -2.03
VPS38Q05919 YMR052C-AYMR052C-A 366 nt2.37□□□□□ -2.03
VPS38Q05919 SEN15YMR059W 387 nt2.37□□□□□ -2.03
VPS38Q05919 DGR1YNL130C-A 147 nt2.37□□□□□ -2.03
VPS38Q05919 TOM22YNL131W 459 nt2.37□□□□□ -2.03
VPS38Q05919 REV1YOR346W 2958 nt2.37□□□□□ -2.03
VPS38Q05919 SLM6YBR266C 453 nt2.37□□□□□ -2.03
VPS38Q05919 GIS1YDR096W 2685 nt2.37□□□□□ -2.03
VPS38Q05919 YJL181WYJL181W 1836 nt2.37□□□□□ -2.03
VPS38Q05919 FMP16YDR070C 282 nt2.36□□□□□ -2.03
VPS38Q05919 YGL014C-AYGL014C-A 162 nt2.36□□□□□ -2.03
VPS38Q05919 YHR125WYHR125W 306 nt2.36□□□□□ -2.03
VPS38Q05919 RPC10YHR143W-A 213 nt2.36□□□□□ -2.03
VPS38Q05919 tT(UGU)Q1tT(UGU)Q1 76 nt2.36□□□□□ -2.03
VPS38Q05919 SHE2YKL130C 741 nt2.36□□□□□ -2.03
VPS38Q05919 AIM29YKR074W 468 nt2.36□□□□□ -2.03
VPS38Q05919 YMR320WYMR320W 306 nt2.36□□□□□ -2.03
VPS38Q05919 RRP12YPL012W 3687 nt2.36□□□□□ -2.03
VPS38Q05919 NUP82YJL061W 2142 nt2.36□□□□□ -2.03
VPS38Q05919 CSF1YLR087C 8877 nt2.36□□□□□ -2.03
VPS38Q05919 MUD2YKL074C 1584 nt2.36□□□□□ -2.03
VPS38Q05919 NAN1YPL126W 2691 nt2.35□□□□□ -2.03
VPS38Q05919 MRP10YDL045W-A 288 nt2.35□□□□□ -2.03
VPS38Q05919 AYR1YIL124W 894 nt2.35□□□□□ -2.03
VPS38Q05919 NCE101YJL205C 162 nt2.35□□□□□ -2.03
VPS38Q05919 YLR264C-AYLR264C-A 117 nt2.35□□□□□ -2.03
VPS38Q05919 LSM7YNL147W 348 nt2.35□□□□□ -2.03
VPS38Q05919 YOR248WYOR248W 303 nt2.35□□□□□ -2.03
VPS38Q05919 snR41snR41 95 nt2.35□□□□□ -2.03
VPS38Q05919 YJL070CYJL070C 2667 nt2.35□□□□□ -2.03
VPS38Q05919 NCL1YBL024W 2055 nt2.35□□□□□ -2.03
VPS38Q05919 SEC16YPL085W 6588 nt2.34□□□□□ -2.03
VPS38Q05919 YDL025W-AYDL025W-A 105 nt2.34□□□□□ -2.03
VPS38Q05919 YRB1YDR002W 606 nt2.34□□□□□ -2.03
VPS38Q05919 PAU14YIL176C 363 nt2.34□□□□□ -2.03
VPS38Q05919 MPH1YIR002C 2982 nt2.34□□□□□ -2.03
VPS38Q05919 PAU1YJL223C 363 nt2.34□□□□□ -2.03
VPS38Q05919 IRC19YLL033W 693 nt2.34□□□□□ -2.03
VPS38Q05919 YLR031WYLR031W 561 nt2.34□□□□□ -2.03
VPS38Q05919 YNL324WYNL324W 396 nt2.34□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms