Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
PRAMEP78395 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 AP005212.1-201ENST00000581547 1997 ntBASIC20.54■□□□□ 0.88
PRAMEP78395 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRAMEP78395 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PRAMEP78395 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.53■□□□□ 0.88
PRAMEP78395 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEP78395 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PRAMEP78395 AC010536.3-201ENST00000620306 533 ntBASIC20.53■□□□□ 0.88
PRAMEP78395 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.53■□□□□ 0.88
PRAMEP78395 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRAMEP78395 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.53■□□□□ 0.88
PRAMEP78395 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PRAMEP78395 GABARAPL3-202ENST00000624044 1851 ntBASIC20.52■□□□□ 0.88
PRAMEP78395 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PRAMEP78395 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PRAMEP78395 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.52■□□□□ 0.88
PRAMEP78395 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.52■□□□□ 0.88
PRAMEP78395 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PRAMEP78395 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
PRAMEP78395 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PRAMEP78395 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRAMEP78395 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
PRAMEP78395 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEP78395 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEP78395 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRAMEP78395 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.51■□□□□ 0.87
PRAMEP78395 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEP78395 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.51■□□□□ 0.87
PRAMEP78395 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 TERF1P5-201ENST00000477545 1207 ntBASIC20.51■□□□□ 0.87
PRAMEP78395 AL162430.1-201ENST00000480705 870 ntBASIC20.51■□□□□ 0.87
PRAMEP78395 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.51■□□□□ 0.87
PRAMEP78395 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.51■□□□□ 0.87
PRAMEP78395 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEP78395 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEP78395 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.51■□□□□ 0.87
PRAMEP78395 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRAMEP78395 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PRAMEP78395 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEP78395 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PRAMEP78395 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
PRAMEP78395 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEP78395 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.5■□□□□ 0.87
PRAMEP78395 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRAMEP78395 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEP78395 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
PRAMEP78395 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PRAMEP78395 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.49■□□□□ 0.87
PRAMEP78395 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms