Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.58■□□□□ 0.56
SIRPAP78324 AC068338.2-201ENST00000563278 1430 ntBASIC18.57■□□□□ 0.56
SIRPAP78324 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 AC006128.1-201ENST00000624704 1661 ntBASIC18.57■□□□□ 0.56
SIRPAP78324 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.57■□□□□ 0.56
SIRPAP78324 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.57■□□□□ 0.56
SIRPAP78324 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.57■□□□□ 0.56
SIRPAP78324 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SIRPAP78324 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.57■□□□□ 0.56
SIRPAP78324 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.57■□□□□ 0.56
SIRPAP78324 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SIRPAP78324 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 RBM17P2-201ENST00000616397 1405 ntBASIC18.57■□□□□ 0.56
SIRPAP78324 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIRPAP78324 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIRPAP78324 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.56■□□□□ 0.56
SIRPAP78324 AL121603.2-201ENST00000557373 2117 ntBASIC18.56■□□□□ 0.56
SIRPAP78324 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.56■□□□□ 0.56
SIRPAP78324 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.56■□□□□ 0.56
SIRPAP78324 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.56■□□□□ 0.56
SIRPAP78324 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.56■□□□□ 0.56
SIRPAP78324 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 AC008694.1-202ENST00000636953 945 ntBASIC18.56■□□□□ 0.56
SIRPAP78324 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.56■□□□□ 0.56
SIRPAP78324 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 GABARAPL3-202ENST00000624044 1851 ntBASIC18.56■□□□□ 0.56
SIRPAP78324 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIRPAP78324 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SIRPAP78324 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SIRPAP78324 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SIRPAP78324 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.55■□□□□ 0.56
SIRPAP78324 TSPY6P-201ENST00000448518 926 ntBASIC18.55■□□□□ 0.56
SIRPAP78324 AC007322.4-201ENST00000509611 723 ntBASIC18.55■□□□□ 0.56
SIRPAP78324 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SIRPAP78324 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.55■□□□□ 0.56
SIRPAP78324 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.55■□□□□ 0.56
SIRPAP78324 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIRPAP78324 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.55■□□□□ 0.56
SIRPAP78324 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.55■□□□□ 0.56
SIRPAP78324 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.55■□□□□ 0.56
SIRPAP78324 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIRPAP78324 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIRPAP78324 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPAP78324 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPAP78324 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SIRPAP78324 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPAP78324 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
SIRPAP78324 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
SIRPAP78324 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPAP78324 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPAP78324 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIRPAP78324 AC245052.3-201ENST00000450182 901 ntBASIC18.54■□□□□ 0.56
SIRPAP78324 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.54■□□□□ 0.56
SIRPAP78324 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.54■□□□□ 0.56
SIRPAP78324 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms