Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC007322.4-201ENST00000509611 723 ntBASIC19.92■□□□□ 0.78
YBX1P67809 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.92■□□□□ 0.78
YBX1P67809 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.92■□□□□ 0.78
YBX1P67809 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.92■□□□□ 0.78
YBX1P67809 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 GABARAPL3-202ENST00000624044 1851 ntBASIC19.92■□□□□ 0.78
YBX1P67809 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
YBX1P67809 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
YBX1P67809 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.91■□□□□ 0.78
YBX1P67809 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.91■□□□□ 0.78
YBX1P67809 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 AC005181.1-201ENST00000604782 1256 ntBASIC19.91■□□□□ 0.78
YBX1P67809 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
YBX1P67809 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
YBX1P67809 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.91■□□□□ 0.78
YBX1P67809 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.91■□□□□ 0.78
YBX1P67809 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
YBX1P67809 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
YBX1P67809 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.91■□□□□ 0.78
YBX1P67809 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
YBX1P67809 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YBX1P67809 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.9■□□□□ 0.78
YBX1P67809 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
YBX1P67809 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.9■□□□□ 0.78
YBX1P67809 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
YBX1P67809 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
YBX1P67809 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YBX1P67809 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.9■□□□□ 0.78
YBX1P67809 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
YBX1P67809 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.9■□□□□ 0.78
YBX1P67809 AL591742.1-201ENST00000604433 565 ntBASIC19.9■□□□□ 0.78
YBX1P67809 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
YBX1P67809 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.9■□□□□ 0.78
YBX1P67809 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YBX1P67809 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
YBX1P67809 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
YBX1P67809 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.9■□□□□ 0.78
YBX1P67809 AC121338.2-201ENST00000622535 1744 ntBASIC19.9■□□□□ 0.78
YBX1P67809 AC027702.1-201ENST00000563810 1770 ntBASIC19.9■□□□□ 0.78
YBX1P67809 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
YBX1P67809 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
YBX1P67809 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
YBX1P67809 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
YBX1P67809 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
YBX1P67809 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YBX1P67809 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
YBX1P67809 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
YBX1P67809 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.89■□□□□ 0.77
YBX1P67809 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.89■□□□□ 0.77
YBX1P67809 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
YBX1P67809 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.89■□□□□ 0.77
YBX1P67809 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.89■□□□□ 0.77
YBX1P67809 CYP2T1P-201ENST00000432607 1285 ntBASIC19.89■□□□□ 0.77
YBX1P67809 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.89■□□□□ 0.77
YBX1P67809 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
YBX1P67809 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.89■□□□□ 0.77
YBX1P67809 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.89■□□□□ 0.77
YBX1P67809 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
YBX1P67809 AC112907.3-201ENST00000577781 2400 ntBASIC19.89■□□□□ 0.77
YBX1P67809 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
YBX1P67809 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
YBX1P67809 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.89■□□□□ 0.77
YBX1P67809 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.89■□□□□ 0.77
YBX1P67809 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
YBX1P67809 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
YBX1P67809 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
YBX1P67809 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.88■□□□□ 0.77
YBX1P67809 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.88■□□□□ 0.77
YBX1P67809 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.88■□□□□ 0.77
YBX1P67809 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
YBX1P67809 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.88■□□□□ 0.77
YBX1P67809 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
YBX1P67809 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms