Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42P60953 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.62■□□□□ 0.57
CDC42P60953 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CDC42P60953 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.62■□□□□ 0.57
CDC42P60953 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42P60953 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
CDC42P60953 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDC42P60953 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDC42P60953 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDC42P60953 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 AL020996.1-203ENST00000536896 2307 ntBASIC18.61■□□□□ 0.57
CDC42P60953 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDC42P60953 AC116562.4-201ENST00000641316 2276 ntBASIC18.61■□□□□ 0.57
CDC42P60953 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDC42P60953 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 AC005224.4-201ENST00000583262 1652 ntBASIC18.61■□□□□ 0.57
CDC42P60953 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CDC42P60953 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC42P60953 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.61■□□□□ 0.57
CDC42P60953 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.61■□□□□ 0.57
CDC42P60953 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDC42P60953 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CDC42P60953 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.61■□□□□ 0.57
CDC42P60953 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.61■□□□□ 0.57
CDC42P60953 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDC42P60953 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42P60953 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42P60953 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC42P60953 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42P60953 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42P60953 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDC42P60953 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC42P60953 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42P60953 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
CDC42P60953 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CDC42P60953 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDC42P60953 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.6■□□□□ 0.57
CDC42P60953 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDC42P60953 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.59■□□□□ 0.57
CDC42P60953 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 BX842568.3-201ENST00000418104 571 ntBASIC18.59■□□□□ 0.57
CDC42P60953 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.59■□□□□ 0.57
CDC42P60953 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.59■□□□□ 0.57
CDC42P60953 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDC42P60953 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.59■□□□□ 0.57
CDC42P60953 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDC42P60953 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.58■□□□□ 0.57
CDC42P60953 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDC42P60953 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.58■□□□□ 0.57
CDC42P60953 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CDC42P60953 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDC42P60953 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CDC42P60953 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDC42P60953 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.58■□□□□ 0.56
CDC42P60953 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
CDC42P60953 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.58■□□□□ 0.56
CDC42P60953 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CDC42P60953 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDC42P60953 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.58■□□□□ 0.56
CDC42P60953 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.58■□□□□ 0.56
CDC42P60953 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDC42P60953 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDC42P60953 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDC42P60953 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.57■□□□□ 0.56
CDC42P60953 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms