Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
WNT3AP56704 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
WNT3AP56704 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 AC020907.5-201ENST00000624372 1936 ntBASIC20.65■□□□□ 0.9
WNT3AP56704 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 CYP2T1P-201ENST00000432607 1285 ntBASIC20.65■□□□□ 0.9
WNT3AP56704 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
WNT3AP56704 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
WNT3AP56704 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.65■□□□□ 0.9
WNT3AP56704 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
WNT3AP56704 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
WNT3AP56704 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
WNT3AP56704 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
WNT3AP56704 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
WNT3AP56704 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.64■□□□□ 0.89
WNT3AP56704 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.64■□□□□ 0.89
WNT3AP56704 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
WNT3AP56704 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.64■□□□□ 0.89
WNT3AP56704 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
WNT3AP56704 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
WNT3AP56704 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.64■□□□□ 0.89
WNT3AP56704 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 CYP21A1P-202ENST00000354927 1481 ntBASIC20.63■□□□□ 0.89
WNT3AP56704 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
WNT3AP56704 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.63■□□□□ 0.89
WNT3AP56704 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.63■□□□□ 0.89
WNT3AP56704 CDCA4P2-201ENST00000441182 718 ntBASIC20.63■□□□□ 0.89
WNT3AP56704 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.63■□□□□ 0.89
WNT3AP56704 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.63■□□□□ 0.89
WNT3AP56704 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.63■□□□□ 0.89
WNT3AP56704 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.63■□□□□ 0.89
WNT3AP56704 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
WNT3AP56704 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
WNT3AP56704 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
WNT3AP56704 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
WNT3AP56704 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.63■□□□□ 0.89
WNT3AP56704 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
WNT3AP56704 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.62■□□□□ 0.89
WNT3AP56704 KRT8P36-201ENST00000489121 1440 ntBASIC20.62■□□□□ 0.89
WNT3AP56704 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
WNT3AP56704 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
WNT3AP56704 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
WNT3AP56704 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
WNT3AP56704 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.62■□□□□ 0.89
WNT3AP56704 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
WNT3AP56704 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.62■□□□□ 0.89
WNT3AP56704 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.62■□□□□ 0.89
WNT3AP56704 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.62■□□□□ 0.89
WNT3AP56704 AC005181.1-201ENST00000604782 1256 ntBASIC20.62■□□□□ 0.89
WNT3AP56704 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
WNT3AP56704 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.62■□□□□ 0.89
WNT3AP56704 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.62■□□□□ 0.89
WNT3AP56704 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.62■□□□□ 0.89
WNT3AP56704 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
WNT3AP56704 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 AC092720.2-201ENST00000602388 1665 ntBASIC20.61■□□□□ 0.89
WNT3AP56704 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
WNT3AP56704 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.61■□□□□ 0.89
WNT3AP56704 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.61■□□□□ 0.89
WNT3AP56704 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.61■□□□□ 0.89
WNT3AP56704 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.61■□□□□ 0.89
WNT3AP56704 AC069236.1-201ENST00000604339 616 ntBASIC20.61■□□□□ 0.89
WNT3AP56704 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.61■□□□□ 0.89
WNT3AP56704 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.61■□□□□ 0.89
WNT3AP56704 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 AC087633.2-202ENST00000565166 1439 ntBASIC20.61■□□□□ 0.89
WNT3AP56704 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
WNT3AP56704 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.61■□□□□ 0.89
WNT3AP56704 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
WNT3AP56704 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms