Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CDH4P55283 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.92■□□□□ 0.94
CDH4P55283 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDH4P55283 PKD1P6-201ENST00000343738 4769 ntBASIC20.92■□□□□ 0.94
CDH4P55283 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH4P55283 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDH4P55283 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH4P55283 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH4P55283 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH4P55283 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDH4P55283 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.91■□□□□ 0.94
CDH4P55283 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CDH4P55283 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.91■□□□□ 0.94
CDH4P55283 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.91■□□□□ 0.94
CDH4P55283 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CDH4P55283 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.91■□□□□ 0.94
CDH4P55283 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDH4P55283 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH4P55283 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CDH4P55283 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH4P55283 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH4P55283 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH4P55283 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
CDH4P55283 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH4P55283 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH4P55283 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH4P55283 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.9■□□□□ 0.94
CDH4P55283 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.9■□□□□ 0.94
CDH4P55283 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDH4P55283 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CDH4P55283 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH4P55283 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDH4P55283 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH4P55283 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.89■□□□□ 0.93
CDH4P55283 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CDH4P55283 C2orf69P4-201ENST00000565394 541 ntBASIC20.89■□□□□ 0.93
CDH4P55283 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH4P55283 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH4P55283 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDH4P55283 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH4P55283 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
CDH4P55283 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.89■□□□□ 0.93
CDH4P55283 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH4P55283 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH4P55283 AL137060.1-201ENST00000618151 2648 ntBASIC20.89■□□□□ 0.93
CDH4P55283 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDH4P55283 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDH4P55283 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH4P55283 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.88■□□□□ 0.93
CDH4P55283 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDH4P55283 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH4P55283 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH4P55283 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CDH4P55283 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDH4P55283 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH4P55283 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH4P55283 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.87■□□□□ 0.93
CDH4P55283 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH4P55283 FP700111.2-201ENST00000619190 1892 ntBASIC20.87■□□□□ 0.93
CDH4P55283 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 AC007225.1-201ENST00000566331 1836 ntBASIC20.87■□□□□ 0.93
CDH4P55283 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH4P55283 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH4P55283 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH4P55283 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH4P55283 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH4P55283 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CDH4P55283 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.86■□□□□ 0.93
CDH4P55283 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CDH4P55283 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.86■□□□□ 0.93
CDH4P55283 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH4P55283 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH4P55283 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH4P55283 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH4P55283 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH4P55283 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH4P55283 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms