Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25■■□□□ 1.59
PDE1AP54750 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25■■□□□ 1.59
PDE1AP54750 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDE1AP54750 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE1AP54750 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.99■■□□□ 1.59
PDE1AP54750 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.99■■□□□ 1.59
PDE1AP54750 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
PDE1AP54750 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.99■■□□□ 1.59
PDE1AP54750 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 RARRES2P4-201ENST00000514074 484 ntBASIC24.99■■□□□ 1.59
PDE1AP54750 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDE1AP54750 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE1AP54750 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE1AP54750 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.99■■□□□ 1.59
PDE1AP54750 AC231657.2-201ENST00000624556 255 ntBASIC24.99■■□□□ 1.59
PDE1AP54750 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.99■■□□□ 1.59
PDE1AP54750 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.98■■□□□ 1.59
PDE1AP54750 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.98■■□□□ 1.59
PDE1AP54750 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.98■■□□□ 1.59
PDE1AP54750 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.98■■□□□ 1.59
PDE1AP54750 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
PDE1AP54750 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.98■■□□□ 1.59
PDE1AP54750 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDE1AP54750 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
PDE1AP54750 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
PDE1AP54750 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PDE1AP54750 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PDE1AP54750 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.97■■□□□ 1.59
PDE1AP54750 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.97■■□□□ 1.59
PDE1AP54750 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.97■■□□□ 1.59
PDE1AP54750 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC24.97■■□□□ 1.59
PDE1AP54750 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.97■■□□□ 1.59
PDE1AP54750 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PDE1AP54750 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PDE1AP54750 AC087633.2-202ENST00000565166 1439 ntBASIC24.96■■□□□ 1.59
PDE1AP54750 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.96■■□□□ 1.59
PDE1AP54750 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PDE1AP54750 AC007322.1-201ENST00000426983 750 ntBASIC24.96■■□□□ 1.59
PDE1AP54750 CYP2T1P-201ENST00000432607 1285 ntBASIC24.96■■□□□ 1.59
PDE1AP54750 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
PDE1AP54750 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.96■■□□□ 1.59
PDE1AP54750 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.96■■□□□ 1.59
PDE1AP54750 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PDE1AP54750 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.96■■□□□ 1.59
PDE1AP54750 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PDE1AP54750 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
PDE1AP54750 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
PDE1AP54750 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
PDE1AP54750 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.95■■□□□ 1.58
PDE1AP54750 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.95■■□□□ 1.58
PDE1AP54750 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.95■■□□□ 1.58
PDE1AP54750 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.95■■□□□ 1.58
PDE1AP54750 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PDE1AP54750 AC080038.1-201ENST00000611274 1154 ntBASIC24.95■■□□□ 1.58
PDE1AP54750 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
PDE1AP54750 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PDE1AP54750 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE1AP54750 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.95■■□□□ 1.58
PDE1AP54750 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE1AP54750 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDE1AP54750 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
PDE1AP54750 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDE1AP54750 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDE1AP54750 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PDE1AP54750 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.94■■□□□ 1.58
PDE1AP54750 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDE1AP54750 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.94■■□□□ 1.58
PDE1AP54750 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.94■■□□□ 1.58
PDE1AP54750 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
PDE1AP54750 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.94■■□□□ 1.58
PDE1AP54750 AL137784.2-201ENST00000607332 1000 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms