Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CYP21A1P-202ENST00000354927 1481 ntBASIC19.84■□□□□ 0.77
PDX1P52945 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.84■□□□□ 0.77
PDX1P52945 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PDX1P52945 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.83■□□□□ 0.77
PDX1P52945 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PDX1P52945 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.83■□□□□ 0.77
PDX1P52945 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PDX1P52945 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PDX1P52945 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDX1P52945 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PDX1P52945 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PDX1P52945 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PDX1P52945 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDX1P52945 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.83■□□□□ 0.76
PDX1P52945 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.83■□□□□ 0.76
PDX1P52945 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PDX1P52945 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.82■□□□□ 0.76
PDX1P52945 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.82■□□□□ 0.76
PDX1P52945 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PDX1P52945 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.82■□□□□ 0.76
PDX1P52945 RPPH1-201ENST00000516869 333 ntBASIC19.82■□□□□ 0.76
PDX1P52945 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.82■□□□□ 0.76
PDX1P52945 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.82■□□□□ 0.76
PDX1P52945 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.82■□□□□ 0.76
PDX1P52945 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.82■□□□□ 0.76
PDX1P52945 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PDX1P52945 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PDX1P52945 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDX1P52945 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.81■□□□□ 0.76
PDX1P52945 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.81■□□□□ 0.76
PDX1P52945 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.81■□□□□ 0.76
PDX1P52945 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.81■□□□□ 0.76
PDX1P52945 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.81■□□□□ 0.76
PDX1P52945 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.81■□□□□ 0.76
PDX1P52945 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 SOX15-203ENST00000570788 1093 ntBASIC19.81■□□□□ 0.76
PDX1P52945 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.81■□□□□ 0.76
PDX1P52945 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.81■□□□□ 0.76
PDX1P52945 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.81■□□□□ 0.76
PDX1P52945 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PDX1P52945 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PDX1P52945 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PDX1P52945 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.81■□□□□ 0.76
PDX1P52945 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
PDX1P52945 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PDX1P52945 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.8■□□□□ 0.76
PDX1P52945 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDX1P52945 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDX1P52945 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDX1P52945 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PDX1P52945 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PDX1P52945 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDX1P52945 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.8■□□□□ 0.76
PDX1P52945 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.8■□□□□ 0.76
PDX1P52945 C1QBPP2-201ENST00000528754 825 ntBASIC19.8■□□□□ 0.76
PDX1P52945 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
PDX1P52945 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PDX1P52945 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.8■□□□□ 0.76
PDX1P52945 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PDX1P52945 AC069544.1-201ENST00000609399 999 ntBASIC19.8■□□□□ 0.76
PDX1P52945 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.8■□□□□ 0.76
PDX1P52945 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PDX1P52945 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.8■□□□□ 0.76
PDX1P52945 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.79■□□□□ 0.76
PDX1P52945 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.79■□□□□ 0.76
PDX1P52945 Z98882.1-201ENST00000622160 2253 ntBASIC19.79■□□□□ 0.76
PDX1P52945 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
PDX1P52945 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PDX1P52945 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.79■□□□□ 0.76
PDX1P52945 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PDX1P52945 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms