Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A2P43004 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC1A2P43004 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A2P43004 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A2P43004 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC1A2P43004 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A2P43004 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A2P43004 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A2P43004 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC1A2P43004 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A2P43004 KRT18P5-201ENST00000436075 1291 ntBASIC20.35■□□□□ 0.85
SLC1A2P43004 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A2P43004 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC1A2P43004 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.35■□□□□ 0.85
SLC1A2P43004 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A2P43004 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC1A2P43004 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
SLC1A2P43004 AC112907.3-201ENST00000577781 2400 ntBASIC20.35■□□□□ 0.85
SLC1A2P43004 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC1A2P43004 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SLC1A2P43004 AC099778.1-201ENST00000568593 1911 ntBASIC20.34■□□□□ 0.85
SLC1A2P43004 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.34■□□□□ 0.85
SLC1A2P43004 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A2P43004 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A2P43004 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 AC010536.3-201ENST00000620306 533 ntBASIC20.34■□□□□ 0.85
SLC1A2P43004 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A2P43004 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC1A2P43004 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC1A2P43004 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
SLC1A2P43004 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
SLC1A2P43004 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
SLC1A2P43004 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC1A2P43004 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A2P43004 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A2P43004 CDV3P1-201ENST00000471403 739 ntBASIC20.33■□□□□ 0.85
SLC1A2P43004 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.33■□□□□ 0.85
SLC1A2P43004 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SLC1A2P43004 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC1A2P43004 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.33■□□□□ 0.84
SLC1A2P43004 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A2P43004 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A2P43004 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A2P43004 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC1A2P43004 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A2P43004 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
SLC1A2P43004 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SLC1A2P43004 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
SLC1A2P43004 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
SLC1A2P43004 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SLC1A2P43004 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A2P43004 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC1A2P43004 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 AC026271.2-201ENST00000428091 497 ntBASIC20.32■□□□□ 0.84
SLC1A2P43004 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A2P43004 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A2P43004 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A2P43004 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.32■□□□□ 0.84
SLC1A2P43004 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A2P43004 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SLC1A2P43004 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC1A2P43004 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC1A2P43004 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC1A2P43004 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC1A2P43004 KRT8P36-201ENST00000489121 1440 ntBASIC20.31■□□□□ 0.84
SLC1A2P43004 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.31■□□□□ 0.84
SLC1A2P43004 TERF1P5-201ENST00000477545 1207 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms