Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.29■□□□□ 0.68
CDKN2CP42773 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.29■□□□□ 0.68
CDKN2CP42773 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDKN2CP42773 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKN2CP42773 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKN2CP42773 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 MIR638-201ENST00000385237 100 ntBASIC19.28■□□□□ 0.68
CDKN2CP42773 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CDKN2CP42773 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 TERF1P2-201ENST00000583350 1212 ntBASIC19.28■□□□□ 0.68
CDKN2CP42773 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CDKN2CP42773 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.28■□□□□ 0.68
CDKN2CP42773 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.28■□□□□ 0.68
CDKN2CP42773 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.28■□□□□ 0.68
CDKN2CP42773 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDKN2CP42773 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2CP42773 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2CP42773 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2CP42773 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2CP42773 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.27■□□□□ 0.68
CDKN2CP42773 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKN2CP42773 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKN2CP42773 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.27■□□□□ 0.68
CDKN2CP42773 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2CP42773 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CDKN2CP42773 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.27■□□□□ 0.67
CDKN2CP42773 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.26■□□□□ 0.67
CDKN2CP42773 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN2CP42773 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN2CP42773 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.26■□□□□ 0.67
CDKN2CP42773 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDKN2CP42773 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDKN2CP42773 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKN2CP42773 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKN2CP42773 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKN2CP42773 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKN2CP42773 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2CP42773 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.26■□□□□ 0.67
CDKN2CP42773 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDKN2CP42773 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDKN2CP42773 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKN2CP42773 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
CDKN2CP42773 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDKN2CP42773 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2CP42773 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2CP42773 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKN2CP42773 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 AC123595.1-201ENST00000440769 1046 ntBASIC19.25■□□□□ 0.67
CDKN2CP42773 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDKN2CP42773 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.25■□□□□ 0.67
CDKN2CP42773 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.25■□□□□ 0.67
CDKN2CP42773 CCDC92B-201ENST00000575506 885 ntBASIC19.25■□□□□ 0.67
CDKN2CP42773 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKN2CP42773 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2CP42773 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2CP42773 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDKN2CP42773 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKN2CP42773 AC004854.2-201ENST00000608450 1441 ntBASIC19.25■□□□□ 0.67
CDKN2CP42773 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2CP42773 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKN2CP42773 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN2CP42773 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms