Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.09□□□□□ -0.15
RPL13AP40429 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RPL13AP40429 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
RPL13AP40429 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.08□□□□□ -0.15
RPL13AP40429 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RPL13AP40429 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL13AP40429 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.08□□□□□ -0.16
RPL13AP40429 AC103834.1-201ENST00000520383 144 ntBASIC14.08□□□□□ -0.16
RPL13AP40429 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.08□□□□□ -0.16
RPL13AP40429 THA1P-201ENST00000590384 1145 ntBASIC14.08□□□□□ -0.16
RPL13AP40429 AL451085.2-201ENST00000605085 799 ntBASIC14.08□□□□□ -0.16
RPL13AP40429 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RPL13AP40429 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
RPL13AP40429 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPL13AP40429 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.08□□□□□ -0.16
RPL13AP40429 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.08□□□□□ -0.16
RPL13AP40429 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RPL13AP40429 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RPL13AP40429 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RPL13AP40429 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RPL13AP40429 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RPL13AP40429 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL13AP40429 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RPL13AP40429 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL13AP40429 AC103724.3-201ENST00000564481 992 ntBASIC14.07□□□□□ -0.16
RPL13AP40429 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL13AP40429 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.07□□□□□ -0.16
RPL13AP40429 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RPL13AP40429 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RPL13AP40429 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
RPL13AP40429 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.07□□□□□ -0.16
RPL13AP40429 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL13AP40429 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RPL13AP40429 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL13AP40429 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.06□□□□□ -0.16
RPL13AP40429 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 AC009299.2-201ENST00000482477 511 ntBASIC14.06□□□□□ -0.16
RPL13AP40429 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RPL13AP40429 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.06□□□□□ -0.16
RPL13AP40429 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 AP005212.1-201ENST00000581547 1997 ntBASIC14.05□□□□□ -0.16
RPL13AP40429 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL13AP40429 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.05□□□□□ -0.16
RPL13AP40429 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RPL13AP40429 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 SMG8-203ENST00000578922 2178 ntBASIC14.05□□□□□ -0.16
RPL13AP40429 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.05□□□□□ -0.16
RPL13AP40429 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 KRT18P24-201ENST00000344739 1156 ntBASIC14.05□□□□□ -0.16
RPL13AP40429 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RPL13AP40429 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RPL13AP40429 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms