Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 PMD1YER132C 5262 nt1.64□□□□□ -2.15
RTR1P40084 YDL062WYDL062W 426 nt1.64□□□□□ -2.15
RTR1P40084 YDR199WYDR199W 366 nt1.64□□□□□ -2.15
RTR1P40084 GPX1YKL026C 504 nt1.64□□□□□ -2.15
RTR1P40084 ERG29YMR134W 714 nt1.64□□□□□ -2.15
RTR1P40084 YBR174CYBR174C 315 nt1.64□□□□□ -2.15
RTR1P40084 SEC63YOR254C 1992 nt1.64□□□□□ -2.15
RTR1P40084 YAR009CYAR009C 3591 nt1.64□□□□□ -2.15
RTR1P40084 CRM1YGR218W 3255 nt1.63□□□□□ -2.15
RTR1P40084 YDL025W-AYDL025W-A 105 nt1.63□□□□□ -2.15
RTR1P40084 RTT102YGR275W 474 nt1.63□□□□□ -2.15
RTR1P40084 YET1YKL065C 621 nt1.63□□□□□ -2.15
RTR1P40084 TRX1YLR043C 312 nt1.63□□□□□ -2.15
RTR1P40084 GIM5YML094W 492 nt1.63□□□□□ -2.15
RTR1P40084 SFG1YOR315W 1041 nt1.63□□□□□ -2.15
RTR1P40084 SPC98YNL126W 2541 nt1.63□□□□□ -2.15
RTR1P40084 TTI1YKL033W 3117 nt1.62□□□□□ -2.15
RTR1P40084 YOR019WYOR019W 2193 nt1.62□□□□□ -2.15
RTR1P40084 BUD26YDR241W 288 nt1.62□□□□□ -2.15
RTR1P40084 RPL22BYFL034C-A 369 nt1.62□□□□□ -2.15
RTR1P40084 HYR1YIR037W 492 nt1.62□□□□□ -2.15
RTR1P40084 RPS30AYLR287C-A 192 nt1.62□□□□□ -2.15
RTR1P40084 RPS16AYMR143W 432 nt1.62□□□□□ -2.15
RTR1P40084 TAZ1YPR140W 1146 nt1.62□□□□□ -2.15
RTR1P40084 SRB7YDR308C 423 nt1.61□□□□□ -2.15
RTR1P40084 TSA2YDR453C 591 nt1.61□□□□□ -2.15
RTR1P40084 YEL018C-AYEL018C-A 534 nt1.61□□□□□ -2.15
RTR1P40084 FAR7YFR008W 666 nt1.61□□□□□ -2.15
RTR1P40084 OST5YGL226C-A 261 nt1.61□□□□□ -2.15
RTR1P40084 YGR242WYGR242W 309 nt1.61□□□□□ -2.15
RTR1P40084 TAP42YMR028W 1101 nt1.61□□□□□ -2.15
RTR1P40084 MRPL44YMR225C 297 nt1.61□□□□□ -2.15
RTR1P40084 YMR230W-AYMR230W-A 189 nt1.61□□□□□ -2.15
RTR1P40084 LSM7YNL147W 348 nt1.61□□□□□ -2.15
RTR1P40084 SWM2YNR004W 441 nt1.61□□□□□ -2.15
RTR1P40084 TRS20YBR254C 528 nt1.61□□□□□ -2.15
RTR1P40084 MGR1YCL044C 1254 nt1.61□□□□□ -2.15
RTR1P40084 COG4YPR105C 2586 nt1.61□□□□□ -2.15
RTR1P40084 PET127YOR017W 2403 nt1.61□□□□□ -2.15
RTR1P40084 APL2YKL135C 2181 nt1.61□□□□□ -2.15
RTR1P40084 NCE101YJL205C 162 nt1.6□□□□□ -2.15
RTR1P40084 YJR023CYJR023C 402 nt1.6□□□□□ -2.15
RTR1P40084 YLR458WYLR458W 381 nt1.6□□□□□ -2.15
RTR1P40084 YML003WYML003W 873 nt1.6□□□□□ -2.15
RTR1P40084 HHT2YNL031C 411 nt1.6□□□□□ -2.15
RTR1P40084 BFA1YJR053W 1725 nt1.6□□□□□ -2.15
RTR1P40084 IRR1YIL026C 3453 nt1.59□□□□□ -2.15
RTR1P40084 KCS1YDR017C 3153 nt1.59□□□□□ -2.15
RTR1P40084 SLX9YGR081C 633 nt1.59□□□□□ -2.15
RTR1P40084 PRS3YHL011C 963 nt1.59□□□□□ -2.15
RTR1P40084 SPO24YPR036W-A 204 nt1.59□□□□□ -2.15
RTR1P40084 SPO22YIL073C 2928 nt1.58□□□□□ -2.16
RTR1P40084 APM3YBR288C 1452 nt1.58□□□□□ -2.16
RTR1P40084 RPL31AYDL075W 342 nt1.58□□□□□ -2.16
RTR1P40084 NTF2YER009W 378 nt1.58□□□□□ -2.16
RTR1P40084 SMD1YGR074W 441 nt1.58□□□□□ -2.16
RTR1P40084 PKR1YMR123W 369 nt1.58□□□□□ -2.16
RTR1P40084 CYB5YNL111C 363 nt1.58□□□□□ -2.16
RTR1P40084 KAR9YPL269W 1935 nt1.58□□□□□ -2.16
RTR1P40084 ADR1YDR216W 3972 nt1.57□□□□□ -2.16
RTR1P40084 RPI1YIL119C 1224 nt1.57□□□□□ -2.16
RTR1P40084 VPS63YLR261C 327 nt1.57□□□□□ -2.16
RTR1P40084 LSM2YBL026W 288 nt1.57□□□□□ -2.16
RTR1P40084 TFB6YOR352W 1032 nt1.57□□□□□ -2.16
RTR1P40084 TBS1YBR150C 3285 nt1.57□□□□□ -2.16
RTR1P40084 NDD1YOR372C 1665 nt1.57□□□□□ -2.16
RTR1P40084 RMD6YEL072W 696 nt1.56□□□□□ -2.16
RTR1P40084 PGD1YGL025C 1194 nt1.56□□□□□ -2.16
RTR1P40084 RPL40AYIL148W 387 nt1.56□□□□□ -2.16
RTR1P40084 IST3YIR005W 447 nt1.56□□□□□ -2.16
RTR1P40084 YJL133C-AYJL133C-A 225 nt1.56□□□□□ -2.16
RTR1P40084 VPS38YLR360W 1320 nt1.56□□□□□ -2.16
RTR1P40084 YOR343W-BYOR343W-B 5313 nt1.56□□□□□ -2.16
RTR1P40084 YDL009CYDL009C 324 nt1.55□□□□□ -2.16
RTR1P40084 YDR042CYDR042C 603 nt1.55□□□□□ -2.16
RTR1P40084 YOR169CYOR169C 465 nt1.55□□□□□ -2.16
RTR1P40084 RPL33BYOR234C 324 nt1.55□□□□□ -2.16
RTR1P40084 SPT14YPL175W 1359 nt1.55□□□□□ -2.16
RTR1P40084 MON2YNL297C 4911 nt1.55□□□□□ -2.16
RTR1P40084 SNO3YFL060C 669 nt1.54□□□□□ -2.16
RTR1P40084 YJL086CYJL086C 369 nt1.54□□□□□ -2.16
RTR1P40084 BUD19YJL188C 309 nt1.54□□□□□ -2.16
RTR1P40084 SNO2YNL334C 669 nt1.54□□□□□ -2.16
RTR1P40084 SUS1YBR111W-A 291 nt1.54□□□□□ -2.16
RTR1P40084 PLC1YPL268W 2610 nt1.54□□□□□ -2.16
RTR1P40084 TRM732YMR259C 4263 nt1.54□□□□□ -2.16
RTR1P40084 OST2YOR103C 393 nt1.53□□□□□ -2.16
RTR1P40084 NOP53YPL146C 1368 nt1.53□□□□□ -2.16
RTR1P40084 AHC1YOR023C 1701 nt1.52□□□□□ -2.17
RTR1P40084 SKI3YPR189W 4299 nt1.52□□□□□ -2.17
RTR1P40084 YER121WYER121W 345 nt1.52□□□□□ -2.17
RTR1P40084 RPF2YKR081C 1035 nt1.52□□□□□ -2.17
RTR1P40084 CLU1YMR012W 3834 nt1.52□□□□□ -2.17
RTR1P40084 YGR109W-BYGR109W-B 4644 nt1.51□□□□□ -2.17
RTR1P40084 RSM18YER050C 417 nt1.51□□□□□ -2.17
RTR1P40084 GRX8YLR364W 330 nt1.51□□□□□ -2.17
RTR1P40084 MGE1YOR232W 687 nt1.51□□□□□ -2.17
RTR1P40084 YPL034WYPL034W 498 nt1.51□□□□□ -2.17
RTR1P40084 RIC1YLR039C 3171 nt1.51□□□□□ -2.17
RTR1P40084 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms