Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.36■□□□□ 0.85
HMGCLP35914 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.36■□□□□ 0.85
HMGCLP35914 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCLP35914 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
HMGCLP35914 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.36■□□□□ 0.85
HMGCLP35914 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.36■□□□□ 0.85
HMGCLP35914 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCLP35914 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGCLP35914 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGCLP35914 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGCLP35914 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
HMGCLP35914 FEM1AP1-201ENST00000431297 1995 ntBASIC20.35■□□□□ 0.85
HMGCLP35914 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGCLP35914 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
HMGCLP35914 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HMGCLP35914 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HMGCLP35914 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HMGCLP35914 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 AL355472.2-201ENST00000422958 438 ntBASIC20.35■□□□□ 0.85
HMGCLP35914 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HMGCLP35914 GUSBP6-202ENST00000438529 1198 ntBASIC20.35■□□□□ 0.85
HMGCLP35914 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.35■□□□□ 0.85
HMGCLP35914 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HMGCLP35914 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.35■□□□□ 0.85
HMGCLP35914 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.35■□□□□ 0.85
HMGCLP35914 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HMGCLP35914 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
HMGCLP35914 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGCLP35914 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HMGCLP35914 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
HMGCLP35914 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGCLP35914 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGCLP35914 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGCLP35914 AL589743.5-201ENST00000616611 1050 ntBASIC20.34■□□□□ 0.85
HMGCLP35914 AC105020.6-201ENST00000621523 1217 ntBASIC20.34■□□□□ 0.85
HMGCLP35914 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGCLP35914 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCLP35914 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGCLP35914 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGCLP35914 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLP35914 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLP35914 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLP35914 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.33■□□□□ 0.85
HMGCLP35914 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
HMGCLP35914 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.33■□□□□ 0.85
HMGCLP35914 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HMGCLP35914 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.33■□□□□ 0.85
HMGCLP35914 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCLP35914 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
HMGCLP35914 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.33■□□□□ 0.84
HMGCLP35914 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.33■□□□□ 0.84
HMGCLP35914 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HMGCLP35914 KRT17P1-201ENST00000399211 1546 ntBASIC20.32■□□□□ 0.84
HMGCLP35914 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HMGCLP35914 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCLP35914 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
HMGCLP35914 SLC29A4P1-201ENST00000398760 971 ntBASIC20.32■□□□□ 0.84
HMGCLP35914 MIPEPP3-201ENST00000412105 444 ntBASIC20.32■□□□□ 0.84
HMGCLP35914 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.32■□□□□ 0.84
HMGCLP35914 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HMGCLP35914 AC073314.1-201ENST00000568729 2216 ntBASIC20.32■□□□□ 0.84
HMGCLP35914 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
HMGCLP35914 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HMGCLP35914 AP005212.1-201ENST00000581547 1997 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms