Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AL353807.1-201ENST00000427475 662 ntBASIC25.35■■□□□ 1.65
PDE6BP35913 KRT16P5-201ENST00000455284 522 ntBASIC25.35■■□□□ 1.65
PDE6BP35913 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.35■■□□□ 1.65
PDE6BP35913 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.35■■□□□ 1.65
PDE6BP35913 KRT18P35-201ENST00000510488 1269 ntBASIC25.35■■□□□ 1.65
PDE6BP35913 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.35■■□□□ 1.65
PDE6BP35913 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.35■■□□□ 1.65
PDE6BP35913 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.35■■□□□ 1.65
PDE6BP35913 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.35■■□□□ 1.65
PDE6BP35913 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PDE6BP35913 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.35■■□□□ 1.65
PDE6BP35913 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDE6BP35913 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDE6BP35913 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDE6BP35913 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.35■■□□□ 1.65
PDE6BP35913 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PDE6BP35913 HTR7P1-201ENST00000538670 1336 ntBASIC25.35■■□□□ 1.65
PDE6BP35913 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.34■■□□□ 1.65
PDE6BP35913 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC25.34■■□□□ 1.65
PDE6BP35913 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.34■■□□□ 1.65
PDE6BP35913 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.34■■□□□ 1.65
PDE6BP35913 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.34■■□□□ 1.65
PDE6BP35913 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
PDE6BP35913 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.34■■□□□ 1.65
PDE6BP35913 NT5C-211ENST00000582170 653 ntTSL 3 BASIC25.34■■□□□ 1.65
PDE6BP35913 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.34■■□□□ 1.65
PDE6BP35913 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PDE6BP35913 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PDE6BP35913 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDE6BP35913 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDE6BP35913 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.33■■□□□ 1.65
PDE6BP35913 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PDE6BP35913 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.33■■□□□ 1.65
PDE6BP35913 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.33■■□□□ 1.65
PDE6BP35913 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDE6BP35913 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDE6BP35913 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PDE6BP35913 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PDE6BP35913 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC25.33■■□□□ 1.65
PDE6BP35913 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PDE6BP35913 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PDE6BP35913 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDE6BP35913 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PDE6BP35913 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDE6BP35913 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.32■■□□□ 1.64
PDE6BP35913 C1orf229-201ENST00000623686 2258 ntBASIC25.32■■□□□ 1.64
PDE6BP35913 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.32■■□□□ 1.64
PDE6BP35913 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.32■■□□□ 1.64
PDE6BP35913 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.32■■□□□ 1.64
PDE6BP35913 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDE6BP35913 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
PDE6BP35913 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PDE6BP35913 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 ARMC10P1-201ENST00000313754 855 ntBASIC25.31■■□□□ 1.64
PDE6BP35913 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
PDE6BP35913 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.31■■□□□ 1.64
PDE6BP35913 AC092865.7-201ENST00000641832 219 ntBASIC25.31■■□□□ 1.64
PDE6BP35913 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PDE6BP35913 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.31■■□□□ 1.64
PDE6BP35913 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.3■■□□□ 1.64
PDE6BP35913 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC25.3■■□□□ 1.64
PDE6BP35913 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
PDE6BP35913 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.3■■□□□ 1.64
PDE6BP35913 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC25.3■■□□□ 1.64
PDE6BP35913 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.3■■□□□ 1.64
PDE6BP35913 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.3■■□□□ 1.64
PDE6BP35913 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PDE6BP35913 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.3■■□□□ 1.64
PDE6BP35913 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 FAM197Y1-201ENST00000421178 764 ntBASIC25.29■■□□□ 1.64
PDE6BP35913 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PDE6BP35913 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.29■■□□□ 1.64
PDE6BP35913 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.29■■□□□ 1.64
PDE6BP35913 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PDE6BP35913 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC25.29■■□□□ 1.64
PDE6BP35913 AC145285.6-201ENST00000604632 637 ntBASIC25.29■■□□□ 1.64
PDE6BP35913 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC25.29■■□□□ 1.64
PDE6BP35913 AL590326.2-201ENST00000625139 305 ntBASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms