Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 YIL020C-AYIL020C-A 339 nt3.3□□□□□ -1.88
DEF1P35732 RPL26AYLR344W 384 nt3.3□□□□□ -1.88
DEF1P35732 DAD3YBR233W-A 285 nt3.3□□□□□ -1.88
DEF1P35732 BUD4YJR092W 4344 nt3.3□□□□□ -1.88
DEF1P35732 RKM1YPL208W 1752 nt3.3□□□□□ -1.88
DEF1P35732 CWC22YGR278W 1734 nt3.3□□□□□ -1.88
DEF1P35732 STU2YLR045C 2667 nt3.29□□□□□ -1.88
DEF1P35732 DRS2YAL026C 4068 nt3.29□□□□□ -1.88
DEF1P35732 WIP1YDR374W-A 270 nt3.29□□□□□ -1.88
DEF1P35732 YJR140W-AYJR140W-A 150 nt3.29□□□□□ -1.88
DEF1P35732 PAU23YLR037C 375 nt3.29□□□□□ -1.88
DEF1P35732 ESF2YNR054C 951 nt3.29□□□□□ -1.88
DEF1P35732 PSY2YNL201C 2577 nt3.29□□□□□ -1.88
DEF1P35732 RIX1YHR197W 2292 nt3.28□□□□□ -1.88
DEF1P35732 IKI3YLR384C 4050 nt3.28□□□□□ -1.88
DEF1P35732 RPB11YOL005C 363 nt3.28□□□□□ -1.88
DEF1P35732 YOL155W-AYOL155W-A 135 nt3.28□□□□□ -1.88
DEF1P35732 YPL142CYPL142C 318 nt3.28□□□□□ -1.88
DEF1P35732 HCS1YKL017C 2052 nt3.28□□□□□ -1.89
DEF1P35732 VPS3YDR495C 3036 nt3.27□□□□□ -1.89
DEF1P35732 EPL1YFL024C 2499 nt3.27□□□□□ -1.89
DEF1P35732 HHF1YBR009C 312 nt3.27□□□□□ -1.89
DEF1P35732 ACM1YPL267W 630 nt3.27□□□□□ -1.89
DEF1P35732 SHQ1YIL104C 1524 nt3.27□□□□□ -1.89
DEF1P35732 AKR1YDR264C 2295 nt3.27□□□□□ -1.89
DEF1P35732 DPB11YJL090C 2295 nt3.27□□□□□ -1.89
DEF1P35732 MCD1YDL003W 1701 nt3.27□□□□□ -1.89
DEF1P35732 ALY1YKR021W 2748 nt3.27□□□□□ -1.89
DEF1P35732 GEA1YJR031C 4227 nt3.27□□□□□ -1.89
DEF1P35732 CDC20YGL116W 1833 nt3.26□□□□□ -1.89
DEF1P35732 CWH41YGL027C 2502 nt3.26□□□□□ -1.89
DEF1P35732 MES1YGR264C 2256 nt3.26□□□□□ -1.89
DEF1P35732 YDL062WYDL062W 426 nt3.26□□□□□ -1.89
DEF1P35732 ARF1YDL192W 546 nt3.26□□□□□ -1.89
DEF1P35732 YDR250CYDR250C 276 nt3.26□□□□□ -1.89
DEF1P35732 TAR1YLR154W-C 375 nt3.26□□□□□ -1.89
DEF1P35732 MRPL33YMR286W 261 nt3.26□□□□□ -1.89
DEF1P35732 YOR050CYOR050C 348 nt3.26□□□□□ -1.89
DEF1P35732 PRK1YIL095W 2433 nt3.25□□□□□ -1.89
DEF1P35732 DNM1YLL001W 2274 nt3.25□□□□□ -1.89
DEF1P35732 YFH1YDL120W 525 nt3.25□□□□□ -1.89
DEF1P35732 RPL35AYDL191W 363 nt3.25□□□□□ -1.89
DEF1P35732 ADK1YDR226W 669 nt3.25□□□□□ -1.89
DEF1P35732 YEL020C-BYEL020C-B 198 nt3.25□□□□□ -1.89
DEF1P35732 OSW7YFR039C 1533 nt3.24□□□□□ -1.89
DEF1P35732 HBT1YDL223C 3141 nt3.24□□□□□ -1.89
DEF1P35732 MDM32YOR147W 1869 nt3.24□□□□□ -1.89
DEF1P35732 ATG13YPR185W 2217 nt3.24□□□□□ -1.89
DEF1P35732 TRS65YGR166W 1683 nt3.24□□□□□ -1.89
DEF1P35732 YHR078WYHR078W 1659 nt3.24□□□□□ -1.89
DEF1P35732 SEC7YDR170C 6030 nt3.24□□□□□ -1.89
DEF1P35732 ALG13YGL047W 609 nt3.24□□□□□ -1.89
DEF1P35732 GPI14YJR013W 1212 nt3.24□□□□□ -1.89
DEF1P35732 RPS22BYLR367W 393 nt3.24□□□□□ -1.89
DEF1P35732 YMR122W-AYMR122W-A 255 nt3.24□□□□□ -1.89
DEF1P35732 YPR053CYPR053C 456 nt3.24□□□□□ -1.89
DEF1P35732 BNR1YIL159W 4128 nt3.24□□□□□ -1.89
DEF1P35732 NUP60YAR002W 1620 nt3.23□□□□□ -1.89
DEF1P35732 YJL222W-BYJL222W-B 138 nt3.23□□□□□ -1.89
DEF1P35732 YOL019W-AYOL019W-A 153 nt3.23□□□□□ -1.89
DEF1P35732 MGR1YCL044C 1254 nt3.23□□□□□ -1.89
DEF1P35732 SGM1YJR134C 2124 nt3.23□□□□□ -1.89
DEF1P35732 YJL016WYJL016W 1686 nt3.23□□□□□ -1.89
DEF1P35732 COX1Q0045 1605 nt3.22□□□□□ -1.89
DEF1P35732 STE6YKL209C 3873 nt3.22□□□□□ -1.89
DEF1P35732 CIN1YOR349W 3045 nt3.22□□□□□ -1.89
DEF1P35732 PSD2YGR170W 3417 nt3.22□□□□□ -1.89
DEF1P35732 YDL185C-AYDL185C-A 228 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)DtK(UUU)D 73 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)G1tK(UUU)G1 73 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)G2tK(UUU)G2 73 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)KtK(UUU)K 73 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)LtK(UUU)L 73 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)OtK(UUU)O 73 nt3.22□□□□□ -1.89
DEF1P35732 tK(UUU)PtK(UUU)P 73 nt3.22□□□□□ -1.89
DEF1P35732 YAL059C-AYAL059C-A 423 nt3.22□□□□□ -1.89
DEF1P35732 YBR064WYBR064W 429 nt3.22□□□□□ -1.89
DEF1P35732 RAD61YDR014W 1944 nt3.22□□□□□ -1.89
DEF1P35732 FUS1YCL027W 1539 nt3.22□□□□□ -1.89
DEF1P35732 TFC4YGR047C 3078 nt3.22□□□□□ -1.89
DEF1P35732 DSE4YNR067C 3354 nt3.21□□□□□ -1.89
DEF1P35732 TAF2YCR042C 4224 nt3.21□□□□□ -1.89
DEF1P35732 DAD4YDR320C-A 219 nt3.21□□□□□ -1.9
DEF1P35732 SNT1YCR033W 3681 nt3.21□□□□□ -1.9
DEF1P35732 HTL1YCR020W-B 237 nt3.2□□□□□ -1.9
DEF1P35732 CSN9YDR179C 489 nt3.2□□□□□ -1.9
DEF1P35732 SDH6YDR379C-A 240 nt3.2□□□□□ -1.9
DEF1P35732 SMT3YDR510W 306 nt3.2□□□□□ -1.9
DEF1P35732 YLR278CYLR278C 4026 nt3.2□□□□□ -1.9
DEF1P35732 FRE8YLR047C 2061 nt3.2□□□□□ -1.9
DEF1P35732 NPR2YEL062W 1848 nt3.19□□□□□ -1.9
DEF1P35732 YDR048CYDR048C 315 nt3.19□□□□□ -1.9
DEF1P35732 YDR193WYDR193W 399 nt3.19□□□□□ -1.9
DEF1P35732 PAU10YDR542W 363 nt3.19□□□□□ -1.9
DEF1P35732 PAU11YGL261C 363 nt3.19□□□□□ -1.9
DEF1P35732 YKL156C-AYKL156C-A 117 nt3.19□□□□□ -1.9
DEF1P35732 PAU4YLR461W 363 nt3.19□□□□□ -1.9
DEF1P35732 SGO1YOR073W 1773 nt3.19□□□□□ -1.9
DEF1P35732 YKU80YMR106C 1890 nt3.19□□□□□ -1.9
DEF1P35732 DBP6YNR038W 1890 nt3.19□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 48.1 ms