Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 KAP122YGL016W 3246 nt0.56□□□□□ -2.32
UFD4P33202 CSE1YGL238W 2883 nt0.56□□□□□ -2.32
UFD4P33202 YGL177WYGL177W 348 nt0.56□□□□□ -2.32
UFD4P33202 NYV1YLR093C 762 nt0.56□□□□□ -2.32
UFD4P33202 YNL143CYNL143C 393 nt0.56□□□□□ -2.32
UFD4P33202 NSL1YPL233W 651 nt0.56□□□□□ -2.32
UFD4P33202 YPR063CYPR063C 423 nt0.56□□□□□ -2.32
UFD4P33202 ISA2YPR067W 558 nt0.56□□□□□ -2.32
UFD4P33202 SAS3YBL052C 2496 nt0.56□□□□□ -2.32
UFD4P33202 ATG38YLR211C 681 nt0.55□□□□□ -2.32
UFD4P33202 YLR444CYLR444C 303 nt0.55□□□□□ -2.32
UFD4P33202 SPP381YBR152W 876 nt0.55□□□□□ -2.32
UFD4P33202 PRK1YIL095W 2433 nt0.55□□□□□ -2.32
UFD4P33202 SEC8YPR055W 3198 nt0.54□□□□□ -2.32
UFD4P33202 CKA1YIL035C 1119 nt0.54□□□□□ -2.32
UFD4P33202 RIF2YLR453C 1188 nt0.54□□□□□ -2.32
UFD4P33202 CPR3YML078W 549 nt0.54□□□□□ -2.32
UFD4P33202 UFE1YOR075W 1041 nt0.54□□□□□ -2.32
UFD4P33202 YER091C-AYER091C-A 222 nt0.54□□□□□ -2.32
UFD4P33202 YJL026C-AYJL026C-A 222 nt0.54□□□□□ -2.32
UFD4P33202 YPR145C-AYPR145C-A 237 nt0.54□□□□□ -2.32
UFD4P33202 SHE3YBR130C 1278 nt0.54□□□□□ -2.32
UFD4P33202 NCA2YPR155C 1851 nt0.53□□□□□ -2.32
UFD4P33202 LYS14YDR034C 2373 nt0.53□□□□□ -2.32
UFD4P33202 YMR31YFR049W 372 nt0.53□□□□□ -2.33
UFD4P33202 SPO74YGL170C 1242 nt0.53□□□□□ -2.33
UFD4P33202 GIM3YNL153C 390 nt0.53□□□□□ -2.33
UFD4P33202 YNL179CYNL179C 438 nt0.53□□□□□ -2.33
UFD4P33202 PET123YOR158W 957 nt0.53□□□□□ -2.33
UFD4P33202 SNC2YOR327C 348 nt0.53□□□□□ -2.33
UFD4P33202 NOP53YPL146C 1368 nt0.52□□□□□ -2.33
UFD4P33202 CRM1YGR218W 3255 nt0.52□□□□□ -2.33
UFD4P33202 ASM4YDL088C 1587 nt0.52□□□□□ -2.33
UFD4P33202 LRS4YDR439W 1044 nt0.51□□□□□ -2.33
UFD4P33202 YLR400WYLR400W 474 nt0.51□□□□□ -2.33
UFD4P33202 YPL035CYPL035C 348 nt0.51□□□□□ -2.33
UFD4P33202 ESA1YOR244W 1338 nt0.51□□□□□ -2.33
UFD4P33202 EPT1YHR123W 1176 nt0.5□□□□□ -2.33
UFD4P33202 MON1YGL124C 1935 nt0.5□□□□□ -2.33
UFD4P33202 AZF1YOR113W 2745 nt0.49□□□□□ -2.33
UFD4P33202 YCR108CYCR108C 192 nt0.49□□□□□ -2.33
UFD4P33202 RNH202YDR279W 1053 nt0.49□□□□□ -2.33
UFD4P33202 YIP1YGR172C 747 nt0.49□□□□□ -2.33
UFD4P33202 PRS3YHL011C 963 nt0.49□□□□□ -2.33
UFD4P33202 MRPL40YPL173W 894 nt0.49□□□□□ -2.33
UFD4P33202 YSW1YBR148W 1830 nt0.49□□□□□ -2.33
UFD4P33202 NSE4YDL105W 1209 nt0.48□□□□□ -2.33
UFD4P33202 YER189WYER189W 369 nt0.48□□□□□ -2.33
UFD4P33202 CSI2YOL007C 1026 nt0.48□□□□□ -2.33
UFD4P33202 ALK1YGL021W 2283 nt0.48□□□□□ -2.33
UFD4P33202 YMR147WYMR147W 672 nt0.48□□□□□ -2.33
UFD4P33202 CLB5YPR120C 1308 nt0.47□□□□□ -2.33
UFD4P33202 IES5YER092W 378 nt0.47□□□□□ -2.33
UFD4P33202 GLC7YER133W 939 nt0.47□□□□□ -2.33
UFD4P33202 RPL9AYGL147C 576 nt0.47□□□□□ -2.33
UFD4P33202 HYR1YIR037W 492 nt0.47□□□□□ -2.33
UFD4P33202 YBR063CYBR063C 1215 nt0.47□□□□□ -2.33
UFD4P33202 TRM12YML005W 1389 nt0.46□□□□□ -2.34
UFD4P33202 CDC10YCR002C 969 nt0.46□□□□□ -2.34
UFD4P33202 YAP3YHL009C 993 nt0.46□□□□□ -2.34
UFD4P33202 YIL161WYIL161W 708 nt0.46□□□□□ -2.34
UFD4P33202 MED11YMR112C 396 nt0.46□□□□□ -2.34
UFD4P33202 SNA4YDL123W 423 nt0.45□□□□□ -2.34
UFD4P33202 YDR355CYDR355C 303 nt0.45□□□□□ -2.34
UFD4P33202 YJL022WYJL022W 309 nt0.45□□□□□ -2.34
UFD4P33202 VPS55YJR044C 423 nt0.45□□□□□ -2.34
UFD4P33202 YBL029WYBL029W 1131 nt0.45□□□□□ -2.34
UFD4P33202 YMR181CYMR181C 465 nt0.45□□□□□ -2.34
UFD4P33202 COG1YGL223C 1254 nt0.44□□□□□ -2.34
UFD4P33202 PRM6YML047C 1059 nt0.44□□□□□ -2.34
UFD4P33202 YPR159C-AYPR159C-A 102 nt0.44□□□□□ -2.34
UFD4P33202 WHI3YNL197C 1986 nt0.44□□□□□ -2.34
UFD4P33202 YGR190CYGR190C 366 nt0.43□□□□□ -2.34
UFD4P33202 MMF1YIL051C 438 nt0.43□□□□□ -2.34
UFD4P33202 KAR9YPL269W 1935 nt0.43□□□□□ -2.34
UFD4P33202 HOP2YGL033W 657 nt0.42□□□□□ -2.34
UFD4P33202 BTN2YGR142W 1233 nt0.42□□□□□ -2.34
UFD4P33202 YIR023C-AYIR023C-A 324 nt0.42□□□□□ -2.34
UFD4P33202 POL4YCR014C 1749 nt0.42□□□□□ -2.34
UFD4P33202 SLY1YDR189W 2001 nt0.42□□□□□ -2.34
UFD4P33202 YTH1YPR107C 627 nt0.41□□□□□ -2.34
UFD4P33202 MVP1YMR004W 1536 nt0.41□□□□□ -2.34
UFD4P33202 BPH1YCR032W 6504 nt0.41□□□□□ -2.34
UFD4P33202 RGI1YER067W 486 nt0.41□□□□□ -2.34
UFD4P33202 YKL177WYKL177W 339 nt0.41□□□□□ -2.34
UFD4P33202 MUM3YOR298W 1440 nt0.4□□□□□ -2.35
UFD4P33202 ARK1YNL020C 1917 nt0.4□□□□□ -2.35
UFD4P33202 SGD1YLR336C 2700 nt0.4□□□□□ -2.35
UFD4P33202 RIM20YOR275C 1986 nt0.4□□□□□ -2.35
UFD4P33202 snR191snR191 274 nt0.39□□□□□ -2.35
UFD4P33202 CLG1YGL215W 1359 nt0.38□□□□□ -2.35
UFD4P33202 PES4YFR023W 1836 nt0.38□□□□□ -2.35
UFD4P33202 YDR248CYDR248C 582 nt0.38□□□□□ -2.35
UFD4P33202 YEA4YEL004W 1029 nt0.38□□□□□ -2.35
UFD4P33202 SPC1YJR010C-A 285 nt0.38□□□□□ -2.35
UFD4P33202 ABM1YJR108W 372 nt0.38□□□□□ -2.35
UFD4P33202 NSE3YDR288W 912 nt0.37□□□□□ -2.35
UFD4P33202 SNC1YAL030W 354 nt0.37□□□□□ -2.35
UFD4P33202 ATG10YLL042C 504 nt0.37□□□□□ -2.35
UFD4P33202 MEI4YER044C-A 1227 nt0.36□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 59.8 ms