Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 AL390719.1-204ENST00000412397 1219 ntBASIC19.37■□□□□ 0.69
CCL4P13236 AC239809.2-201ENST00000415381 517 ntBASIC19.37■□□□□ 0.69
CCL4P13236 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL4P13236 AC073912.3-201ENST00000624414 853 ntBASIC19.37■□□□□ 0.69
CCL4P13236 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CCL4P13236 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL4P13236 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL4P13236 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCL4P13236 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL4P13236 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 RPS2P55-201ENST00000397318 883 ntBASIC19.36■□□□□ 0.69
CCL4P13236 ECEL1P3-201ENST00000427961 737 ntBASIC19.36■□□□□ 0.69
CCL4P13236 AC133681.1-201ENST00000465482 601 ntBASIC19.36■□□□□ 0.69
CCL4P13236 AC107956.1-201ENST00000494359 873 ntBASIC19.36■□□□□ 0.69
CCL4P13236 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL4P13236 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.36■□□□□ 0.69
CCL4P13236 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.36■□□□□ 0.69
CCL4P13236 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
CCL4P13236 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL4P13236 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCL4P13236 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.35■□□□□ 0.69
CCL4P13236 KRASP1-201ENST00000407852 552 ntBASIC19.35■□□□□ 0.69
CCL4P13236 AC012618.2-201ENST00000428058 849 ntBASIC19.35■□□□□ 0.69
CCL4P13236 TSPY7P-201ENST00000431358 1114 ntBASIC19.35■□□□□ 0.69
CCL4P13236 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCL4P13236 AC233702.5-201ENST00000584107 538 ntBASIC19.35■□□□□ 0.69
CCL4P13236 REXO1L12P-201ENST00000622156 912 ntBASIC19.35■□□□□ 0.69
CCL4P13236 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CCL4P13236 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.35■□□□□ 0.69
CCL4P13236 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL4P13236 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.35■□□□□ 0.69
CCL4P13236 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.35■□□□□ 0.69
CCL4P13236 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCL4P13236 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL4P13236 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCL4P13236 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.34■□□□□ 0.69
CCL4P13236 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCL4P13236 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCL4P13236 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL4P13236 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL4P13236 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CCL4P13236 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL4P13236 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL4P13236 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL4P13236 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCL4P13236 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.33■□□□□ 0.69
CCL4P13236 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL4P13236 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.33■□□□□ 0.69
CCL4P13236 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL4P13236 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCL4P13236 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.33■□□□□ 0.68
CCL4P13236 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.33■□□□□ 0.68
CCL4P13236 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL4P13236 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCL4P13236 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.33■□□□□ 0.68
CCL4P13236 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.33■□□□□ 0.68
CCL4P13236 AC110285.5-201ENST00000611501 352 ntBASIC19.33■□□□□ 0.68
CCL4P13236 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL4P13236 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL4P13236 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms