Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 MOT1YPL082C 5604 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 MMS1YPR164W 4224 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 YGL014C-AYGL014C-A 162 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 PNC1YGL037C 651 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 NFU1YKL040C 771 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 YLR031WYLR031W 561 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 PRE8YML092C 753 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 TOM1YDR457W 9807 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 RIF1YBR275C 5751 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 DNA2YHR164C 4569 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 AMS1YGL156W 3252 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 SNX41YDR425W 1878 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 GIN4YDR507C 3429 nt2.54□□□□□ -2
TY2A-LR1P0C2J4 VPS52YDR484W 1926 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 YER068C-AYER068C-A 432 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 YFR056CYFR056C 369 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 Q0142Q0142 177 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 YGR050CYGR050C 357 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 VOA1YGR106C 798 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 YHR138CYHR138C 345 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 AYR1YIL124W 894 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 PET191YJR034W 327 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 YOR392WYOR392W 444 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 RLI1YDR091C 1827 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 CDC20YGL116W 1833 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 PFF1YBR074W 2931 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 PTC5YOR090C 1719 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 UBP11YKR098C 2154 nt2.53□□□□□ -2
TY2A-LR1P0C2J4 VPS16YPL045W 2397 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 HOS4YIL112W 3252 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 YDL041WYDL041W 354 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 SWF1YDR126W 1011 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 ACB1YGR037C 264 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 RPL14BYHL001W 417 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 YHL009W-AYHL009W-A 1242 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 COX7YMR256C 183 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 MRPL33YMR286W 261 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 YNL010WYNL010W 726 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 YOR053WYOR053W 342 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 YOR293C-AYOR293C-A 150 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 YPL261CYPL261C 309 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 INP53YOR109W 3324 nt2.52□□□□□ -2.01
TY2A-LR1P0C2J4 INP51YIL002C 2841 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 NCL1YBL024W 2055 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 SAK1YER129W 3429 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 YDL025W-AYDL025W-A 105 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 MZM1YDR493W 372 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 YER076W-AYER076W-A 348 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 YHR139C-AYHR139C-A 312 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 ROX1YPR065W 1107 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 YBR285WYBR285W 435 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 REV1YOR346W 2958 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 YJL070CYJL070C 2667 nt2.51□□□□□ -2.01
TY2A-LR1P0C2J4 ESL1YIL151C 3357 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 SEC7YDR170C 6030 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 RSE1YML049C 4086 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 SPC72YAL047C 1869 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 tR(ACG)Q2tR(ACG)Q2 74 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 YKL066WYKL066W 444 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 ATP3YBR039W 936 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 YIL080WYIL080W 4722 nt2.5□□□□□ -2.01
TY2A-LR1P0C2J4 MSS11YMR164C 2277 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 IRC10YOL015W 1761 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 RRP12YPL012W 3687 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 FMP16YDR070C 282 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 YDR250CYDR250C 276 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 SDH7YDR511W 402 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 GIM4YEL003W 336 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 YHR086W-AYHR086W-A 162 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 LSM7YNL147W 348 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 PTP3YER075C 2787 nt2.49□□□□□ -2.01
TY2A-LR1P0C2J4 HSC82YMR186W 2118 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 PRK1YIL095W 2433 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 MPH1YIR002C 2982 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 SDC1YDR469W 528 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 YAL068W-AYAL068W-A 255 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 RPS22BYLR367W 393 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 PDR1YGL013C 3207 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 MKT1YNL085W 2493 nt2.48□□□□□ -2.01
TY2A-LR1P0C2J4 YNL018CYNL018C 1839 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 COX1Q0045 1605 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 YEL043WYEL043W 2871 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 SHE2YKL130C 741 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 YPL185WYPL185W 396 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 YBR277CYBR277C 402 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 IPT1YDR072C 1584 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 YDR186CYDR186C 2634 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 CBF2YGR140W 2871 nt2.47□□□□□ -2.01
TY2A-LR1P0C2J4 NAN1YPL126W 2691 nt2.46□□□□□ -2.01
TY2A-LR1P0C2J4 SMY2YBR172C 2223 nt2.46□□□□□ -2.01
TY2A-LR1P0C2J4 MSL5YLR116W 1431 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 ESC1YMR219W 4977 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 snR79snR79 84 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 GRX8YLR364W 330 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 YOR050CYOR050C 348 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 YOR192C-CYOR192C-C 237 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 EGD1YPL037C 474 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 DAS1YJL149W 1992 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 SWA2YDR320C 2007 nt2.46□□□□□ -2.02
TY2A-LR1P0C2J4 TOP2YNL088W 4287 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms