Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
RETP07949 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RETP07949 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.62■□□□□ 0.89
RETP07949 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RETP07949 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.62■□□□□ 0.89
RETP07949 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.62■□□□□ 0.89
RETP07949 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
RETP07949 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.62■□□□□ 0.89
RETP07949 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.62■□□□□ 0.89
RETP07949 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RETP07949 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.62■□□□□ 0.89
RETP07949 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETP07949 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.61■□□□□ 0.89
RETP07949 AC026310.3-201ENST00000625186 2373 ntBASIC20.61■□□□□ 0.89
RETP07949 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RETP07949 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.61■□□□□ 0.89
RETP07949 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RETP07949 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RETP07949 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.61■□□□□ 0.89
RETP07949 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.61■□□□□ 0.89
RETP07949 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RETP07949 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETP07949 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.6■□□□□ 0.89
RETP07949 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.6■□□□□ 0.89
RETP07949 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
RETP07949 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
RETP07949 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RETP07949 AC133681.1-201ENST00000465482 601 ntBASIC20.6■□□□□ 0.89
RETP07949 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.6■□□□□ 0.89
RETP07949 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.6■□□□□ 0.89
RETP07949 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.6■□□□□ 0.89
RETP07949 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETP07949 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.59■□□□□ 0.89
RETP07949 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.59■□□□□ 0.89
RETP07949 AC010542.4-201ENST00000563151 1910 ntBASIC20.59■□□□□ 0.89
RETP07949 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
RETP07949 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.59■□□□□ 0.89
RETP07949 TMPOP1-202ENST00000424642 1267 ntBASIC20.59■□□□□ 0.89
RETP07949 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.59■□□□□ 0.89
RETP07949 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RETP07949 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.59■□□□□ 0.89
RETP07949 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.59■□□□□ 0.89
RETP07949 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETP07949 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.59■□□□□ 0.89
RETP07949 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.58■□□□□ 0.89
RETP07949 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.58■□□□□ 0.89
RETP07949 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 TSPY15P-201ENST00000457163 923 ntBASIC20.58■□□□□ 0.89
RETP07949 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.58■□□□□ 0.89
RETP07949 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
RETP07949 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.58■□□□□ 0.89
RETP07949 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.58■□□□□ 0.89
RETP07949 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.58■□□□□ 0.89
RETP07949 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RETP07949 MTDHP1-201ENST00000605323 784 ntBASIC20.58■□□□□ 0.89
RETP07949 CD177P1-201ENST00000606252 935 ntBASIC20.58■□□□□ 0.89
RETP07949 AC124016.1-201ENST00000609552 612 ntBASIC20.58■□□□□ 0.89
RETP07949 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.58■□□□□ 0.89
RETP07949 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms