Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN1P07384 AC008175.2-201ENST00000612840 297 ntBASIC20.05■□□□□ 0.8
CAPN1P07384 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.05■□□□□ 0.8
CAPN1P07384 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CAPN1P07384 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN1P07384 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN1P07384 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CAPN1P07384 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.04■□□□□ 0.8
CAPN1P07384 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN1P07384 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN1P07384 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
CAPN1P07384 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.04■□□□□ 0.8
CAPN1P07384 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN1P07384 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CAPN1P07384 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN1P07384 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CAPN1P07384 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPN1P07384 GPX1P1-201ENST00000388829 606 ntBASIC20.03■□□□□ 0.8
CAPN1P07384 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 POU5F1P4-201ENST00000413175 1085 ntBASIC20.03■□□□□ 0.8
CAPN1P07384 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 AC007322.1-201ENST00000426983 750 ntBASIC20.03■□□□□ 0.8
CAPN1P07384 CNN2P6-201ENST00000439038 900 ntBASIC20.03■□□□□ 0.8
CAPN1P07384 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPN1P07384 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.03■□□□□ 0.8
CAPN1P07384 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.03■□□□□ 0.8
CAPN1P07384 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CAPN1P07384 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 AC027702.1-201ENST00000563810 1770 ntBASIC20.03■□□□□ 0.8
CAPN1P07384 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CAPN1P07384 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN1P07384 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN1P07384 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN1P07384 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN1P07384 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN1P07384 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN1P07384 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN1P07384 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN1P07384 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN1P07384 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN1P07384 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.02■□□□□ 0.8
CAPN1P07384 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CAPN1P07384 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.02■□□□□ 0.8
CAPN1P07384 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CAPN1P07384 AC011484.1-201ENST00000377652 1995 ntBASIC20.02■□□□□ 0.8
CAPN1P07384 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CAPN1P07384 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN1P07384 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CAPN1P07384 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CAPN1P07384 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPN1P07384 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CAPN1P07384 FP700111.2-201ENST00000619190 1892 ntBASIC20.01■□□□□ 0.79
CAPN1P07384 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPN1P07384 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CAPN1P07384 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.01■□□□□ 0.79
CAPN1P07384 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.01■□□□□ 0.79
CAPN1P07384 SLC7A5P1-201ENST00000568957 537 ntBASIC20.01■□□□□ 0.79
CAPN1P07384 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.01■□□□□ 0.79
CAPN1P07384 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.01■□□□□ 0.79
CAPN1P07384 AC005181.1-201ENST00000604782 1256 ntBASIC20.01■□□□□ 0.79
CAPN1P07384 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CAPN1P07384 AC010536.3-201ENST00000620306 533 ntBASIC20.01■□□□□ 0.79
CAPN1P07384 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPN1P07384 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPN1P07384 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.01■□□□□ 0.79
CAPN1P07384 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CAPN1P07384 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CAPN1P07384 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.01■□□□□ 0.79
CAPN1P07384 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms