Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 AIRN-201ENST00000601203 4374 ntBASIC18.46■□□□□ 0.55
HMGN1P05114 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HMGN1P05114 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGN1P05114 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGN1P05114 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGN1P05114 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
HMGN1P05114 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
HMGN1P05114 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGN1P05114 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.45■□□□□ 0.54
HMGN1P05114 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 AL355001.2-201ENST00000620617 1191 ntBASIC18.45■□□□□ 0.54
HMGN1P05114 AC120498.10-201ENST00000621827 505 ntBASIC18.45■□□□□ 0.54
HMGN1P05114 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGN1P05114 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGN1P05114 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
HMGN1P05114 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HMGN1P05114 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.45■□□□□ 0.54
HMGN1P05114 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGN1P05114 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HMGN1P05114 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HMGN1P05114 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
HMGN1P05114 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
HMGN1P05114 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
HMGN1P05114 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 KRT16P2-201ENST00000414673 1423 ntBASIC18.44■□□□□ 0.54
HMGN1P05114 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGN1P05114 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 AC096631.2-201ENST00000436136 790 ntBASIC18.44■□□□□ 0.54
HMGN1P05114 AL354811.1-201ENST00000610286 706 ntBASIC18.44■□□□□ 0.54
HMGN1P05114 RARRES2P11-201ENST00000635158 484 ntBASIC18.44■□□□□ 0.54
HMGN1P05114 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HMGN1P05114 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.44■□□□□ 0.54
HMGN1P05114 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.44■□□□□ 0.54
HMGN1P05114 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HMGN1P05114 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 TCF3P1-201ENST00000423021 1937 ntBASIC18.43■□□□□ 0.54
HMGN1P05114 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
HMGN1P05114 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.43■□□□□ 0.54
HMGN1P05114 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 TPRG1LP1-201ENST00000598702 760 ntBASIC18.43■□□□□ 0.54
HMGN1P05114 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
HMGN1P05114 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
HMGN1P05114 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.43■□□□□ 0.54
HMGN1P05114 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGN1P05114 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGN1P05114 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HMGN1P05114 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGN1P05114 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGN1P05114 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HMGN1P05114 MIR939-201ENST00000401314 82 ntBASIC18.42■□□□□ 0.54
HMGN1P05114 AC091305.1-201ENST00000479476 895 ntBASIC18.42■□□□□ 0.54
HMGN1P05114 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGN1P05114 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HMGN1P05114 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HMGN1P05114 MIR2861-201ENST00000636310 90 ntBASIC18.42■□□□□ 0.54
HMGN1P05114 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HMGN1P05114 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.42■□□□□ 0.54
HMGN1P05114 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGN1P05114 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.42■□□□□ 0.54
HMGN1P05114 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGN1P05114 KRT87P-202ENST00000534226 1464 ntBASIC18.41■□□□□ 0.54
HMGN1P05114 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGN1P05114 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HMGN1P05114 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGN1P05114 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGN1P05114 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HMGN1P05114 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.41■□□□□ 0.54
HMGN1P05114 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms