Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 IGHV3-19-201ENST00000521488 291 ntBASIC15.51■□□□□ 0.07
TCRAP04437 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRAP04437 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TCRAP04437 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.51■□□□□ 0.07
TCRAP04437 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRAP04437 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.51■□□□□ 0.07
TCRAP04437 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.51■□□□□ 0.07
TCRAP04437 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.51■□□□□ 0.07
TCRAP04437 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TCRAP04437 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TCRAP04437 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
TCRAP04437 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TCRAP04437 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRAP04437 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TCRAP04437 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TCRAP04437 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TCRAP04437 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRAP04437 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.5■□□□□ 0.07
TCRAP04437 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.5■□□□□ 0.07
TCRAP04437 AC126544.1-201ENST00000580842 1059 ntBASIC15.5■□□□□ 0.07
TCRAP04437 AC053503.5-201ENST00000601508 636 ntBASIC15.5■□□□□ 0.07
TCRAP04437 AC233992.3-201ENST00000607491 485 ntBASIC15.5■□□□□ 0.07
TCRAP04437 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TCRAP04437 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC15.5■□□□□ 0.07
TCRAP04437 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.5■□□□□ 0.07
TCRAP04437 AC138932.1-201ENST00000534164 6830 ntBASIC15.5■□□□□ 0.07
TCRAP04437 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TCRAP04437 AC061975.6-201ENST00000579045 1553 ntBASIC15.49■□□□□ 0.07
TCRAP04437 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRAP04437 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRAP04437 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRAP04437 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.49■□□□□ 0.07
TCRAP04437 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 EEF1DP3-203ENST00000566025 782 ntBASIC15.49■□□□□ 0.07
TCRAP04437 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TCRAP04437 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.49■□□□□ 0.07
TCRAP04437 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TCRAP04437 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TCRAP04437 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
TCRAP04437 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRAP04437 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
TCRAP04437 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRAP04437 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.48■□□□□ 0.07
TCRAP04437 AC105233.4-201ENST00000642045 216 ntBASIC15.48■□□□□ 0.07
TCRAP04437 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.48■□□□□ 0.07
TCRAP04437 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TCRAP04437 AC125437.2-201ENST00000625180 2167 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms