Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.06■□□□□ 0.64
PDGFAP04085 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDGFAP04085 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PDGFAP04085 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDGFAP04085 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PDGFAP04085 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
PDGFAP04085 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.05■□□□□ 0.64
PDGFAP04085 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PDGFAP04085 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDGFAP04085 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PDGFAP04085 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDGFAP04085 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFAP04085 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.04■□□□□ 0.64
PDGFAP04085 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PDGFAP04085 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PDGFAP04085 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 KRT18P68-201ENST00000392293 1000 ntBASIC19.04■□□□□ 0.64
PDGFAP04085 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 KRT17P3-201ENST00000420566 1262 ntBASIC19.04■□□□□ 0.64
PDGFAP04085 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 SNORA78-201ENST00000459373 127 ntBASIC19.04■□□□□ 0.64
PDGFAP04085 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.04■□□□□ 0.64
PDGFAP04085 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.04■□□□□ 0.64
PDGFAP04085 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PDGFAP04085 SOX15-203ENST00000570788 1093 ntBASIC19.04■□□□□ 0.64
PDGFAP04085 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.04■□□□□ 0.64
PDGFAP04085 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDGFAP04085 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PDGFAP04085 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.04■□□□□ 0.64
PDGFAP04085 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.03■□□□□ 0.64
PDGFAP04085 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
PDGFAP04085 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PDGFAP04085 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 AC092053.2-201ENST00000640557 1818 ntBASIC19.03■□□□□ 0.64
PDGFAP04085 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.03■□□□□ 0.64
PDGFAP04085 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFAP04085 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFAP04085 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFAP04085 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.03■□□□□ 0.64
PDGFAP04085 AC069544.1-201ENST00000609399 999 ntBASIC19.03■□□□□ 0.64
PDGFAP04085 AC073912.3-201ENST00000624414 853 ntBASIC19.03■□□□□ 0.64
PDGFAP04085 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDGFAP04085 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.03■□□□□ 0.64
PDGFAP04085 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.02■□□□□ 0.64
PDGFAP04085 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
PDGFAP04085 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.02■□□□□ 0.64
PDGFAP04085 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
PDGFAP04085 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDGFAP04085 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDGFAP04085 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDGFAP04085 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
PDGFAP04085 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFAP04085 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFAP04085 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDGFAP04085 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PDGFAP04085 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PDGFAP04085 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PDGFAP04085 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PDGFAP04085 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDGFAP04085 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms