Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 AC104187.1-201ENST00000607510 612 ntBASIC18.29■□□□□ 0.52
HLA-DQA2P01906 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-DQA2P01906 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L2-201ENST00000561772 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L6-201ENST00000626483 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L1-201ENST00000627662 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L8-201ENST00000629013 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L3-201ENST00000630187 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L7-201ENST00000630678 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 DUX4L5-201ENST00000630834 1275 ntBASIC18.28■□□□□ 0.52
HLA-DQA2P01906 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-DQA2P01906 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 AC020907.5-201ENST00000624372 1936 ntBASIC18.27■□□□□ 0.52
HLA-DQA2P01906 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 AC010141.2-201ENST00000452426 721 ntBASIC18.27■□□□□ 0.52
HLA-DQA2P01906 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-DQA2P01906 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HLA-DQA2P01906 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
HLA-DQA2P01906 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.27■□□□□ 0.51
HLA-DQA2P01906 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.27■□□□□ 0.51
HLA-DQA2P01906 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HLA-DQA2P01906 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 AC123595.1-201ENST00000440769 1046 ntBASIC18.26■□□□□ 0.51
HLA-DQA2P01906 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 TERF1P2-201ENST00000583350 1212 ntBASIC18.26■□□□□ 0.51
HLA-DQA2P01906 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-DQA2P01906 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 YBX1P1-201ENST00000445822 960 ntBASIC18.25■□□□□ 0.51
HLA-DQA2P01906 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 AP001160.3-201ENST00000601484 763 ntBASIC18.25■□□□□ 0.51
HLA-DQA2P01906 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.25■□□□□ 0.51
HLA-DQA2P01906 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms