Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN1O95832 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN1O95832 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 AL135905.2-201ENST00000584934 1404 ntBASIC18.23■□□□□ 0.51
CLDN1O95832 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
CLDN1O95832 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN1O95832 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLDN1O95832 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN1O95832 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN1O95832 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
CLDN1O95832 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN1O95832 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 AL353708.3-201ENST00000610272 989 ntBASIC18.23■□□□□ 0.51
CLDN1O95832 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.23■□□□□ 0.51
CLDN1O95832 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN1O95832 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN1O95832 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN1O95832 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN1O95832 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN1O95832 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN1O95832 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLDN1O95832 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 KRT18P68-201ENST00000392293 1000 ntBASIC18.22■□□□□ 0.51
CLDN1O95832 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN1O95832 CDV3P1-201ENST00000471403 739 ntBASIC18.22■□□□□ 0.51
CLDN1O95832 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN1O95832 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN1O95832 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN1O95832 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN1O95832 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN1O95832 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN1O95832 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
CLDN1O95832 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CLDN1O95832 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN1O95832 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN1O95832 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN1O95832 AC127496.7-201ENST00000625110 1798 ntBASIC18.21■□□□□ 0.51
CLDN1O95832 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN1O95832 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN1O95832 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.21■□□□□ 0.5
CLDN1O95832 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN1O95832 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
CLDN1O95832 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN1O95832 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 AC239809.2-201ENST00000415381 517 ntBASIC18.2■□□□□ 0.5
CLDN1O95832 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN1O95832 PRKY-204ENST00000533551 1019 ntBASIC18.2■□□□□ 0.5
CLDN1O95832 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN1O95832 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CLDN1O95832 AC242852.2-201ENST00000615738 1807 ntBASIC18.2■□□□□ 0.5
CLDN1O95832 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN1O95832 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN1O95832 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN1O95832 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN1O95832 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN1O95832 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms