Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.69■■□□□ 1.38
PRPF40AO75400 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.69■■□□□ 1.38
PRPF40AO75400 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PRPF40AO75400 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.69■■□□□ 1.38
PRPF40AO75400 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
PRPF40AO75400 AL158211.5-201ENST00000623583 2518 ntBASIC23.69■■□□□ 1.38
PRPF40AO75400 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.69■■□□□ 1.38
PRPF40AO75400 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRPF40AO75400 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PRPF40AO75400 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.68■■□□□ 1.38
PRPF40AO75400 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPF40AO75400 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 AC105265.2-201ENST00000467189 838 ntBASIC23.68■■□□□ 1.38
PRPF40AO75400 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.68■■□□□ 1.38
PRPF40AO75400 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.68■■□□□ 1.38
PRPF40AO75400 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.68■■□□□ 1.38
PRPF40AO75400 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPF40AO75400 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPF40AO75400 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPF40AO75400 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
PRPF40AO75400 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPF40AO75400 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPF40AO75400 AC098818.2-201ENST00000564925 2320 ntBASIC23.67■■□□□ 1.38
PRPF40AO75400 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPF40AO75400 AC005224.4-201ENST00000583262 1652 ntBASIC23.67■■□□□ 1.38
PRPF40AO75400 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPF40AO75400 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.67■■□□□ 1.38
PRPF40AO75400 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PRPF40AO75400 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.67■■□□□ 1.38
PRPF40AO75400 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRPF40AO75400 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF40AO75400 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PRPF40AO75400 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF40AO75400 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF40AO75400 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF40AO75400 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PRPF40AO75400 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF40AO75400 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF40AO75400 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF40AO75400 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF40AO75400 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF40AO75400 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPF40AO75400 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPF40AO75400 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.65■■□□□ 1.38
PRPF40AO75400 AC018445.3-201ENST00000624177 1945 ntBASIC23.65■■□□□ 1.38
PRPF40AO75400 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.65■■□□□ 1.38
PRPF40AO75400 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.65■■□□□ 1.38
PRPF40AO75400 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.65■■□□□ 1.38
PRPF40AO75400 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PRPF40AO75400 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.65■■□□□ 1.38
PRPF40AO75400 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPF40AO75400 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
PRPF40AO75400 AC061975.6-201ENST00000579045 1553 ntBASIC23.65■■□□□ 1.38
PRPF40AO75400 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.64■■□□□ 1.38
PRPF40AO75400 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPF40AO75400 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
PRPF40AO75400 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRPF40AO75400 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRPF40AO75400 IGHV3-19-201ENST00000521488 291 ntBASIC23.64■■□□□ 1.37
PRPF40AO75400 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.64■■□□□ 1.37
PRPF40AO75400 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRPF40AO75400 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms