Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.32■□□□□ 0.52
PFDN1O60925 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PFDN1O60925 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
PFDN1O60925 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
PFDN1O60925 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.32■□□□□ 0.52
PFDN1O60925 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PFDN1O60925 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PFDN1O60925 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 AL390961.4-201ENST00000623958 2535 ntBASIC18.31■□□□□ 0.52
PFDN1O60925 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PFDN1O60925 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.31■□□□□ 0.52
PFDN1O60925 AC136428.2-201ENST00000563187 214 ntBASIC18.31■□□□□ 0.52
PFDN1O60925 AL512408.1-201ENST00000569378 2000 ntBASIC18.31■□□□□ 0.52
PFDN1O60925 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PFDN1O60925 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PFDN1O60925 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PFDN1O60925 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PFDN1O60925 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PFDN1O60925 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PFDN1O60925 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.3■□□□□ 0.52
PFDN1O60925 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PFDN1O60925 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.3■□□□□ 0.52
PFDN1O60925 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PFDN1O60925 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.3■□□□□ 0.52
PFDN1O60925 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PFDN1O60925 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
PFDN1O60925 AC104581.1-202ENST00000635932 2618 ntBASIC18.3■□□□□ 0.52
PFDN1O60925 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.3■□□□□ 0.52
PFDN1O60925 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PFDN1O60925 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.3■□□□□ 0.52
PFDN1O60925 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.29■□□□□ 0.52
PFDN1O60925 AC090877.2-201ENST00000558441 1738 ntBASIC18.29■□□□□ 0.52
PFDN1O60925 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
PFDN1O60925 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PFDN1O60925 AL138781.2-201ENST00000617896 1843 ntBASIC18.29■□□□□ 0.52
PFDN1O60925 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.29■□□□□ 0.52
PFDN1O60925 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.29■□□□□ 0.52
PFDN1O60925 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
PFDN1O60925 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PFDN1O60925 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PFDN1O60925 PRORSD1P-202ENST00000563365 2154 ntBASIC18.28■□□□□ 0.52
PFDN1O60925 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PFDN1O60925 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PFDN1O60925 AL022069.1-201ENST00000568025 1636 ntBASIC18.28■□□□□ 0.52
PFDN1O60925 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.28■□□□□ 0.52
PFDN1O60925 AC104564.3-201ENST00000582367 638 ntBASIC18.28■□□□□ 0.52
PFDN1O60925 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PFDN1O60925 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN1O60925 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
PFDN1O60925 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.28■□□□□ 0.52
PFDN1O60925 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PFDN1O60925 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PFDN1O60925 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PFDN1O60925 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PFDN1O60925 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PFDN1O60925 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms