Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NOBOXO60393 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.19■□□□□ 0.82
NOBOXO60393 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOBOXO60393 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOBOXO60393 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
NOBOXO60393 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NOBOXO60393 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NOBOXO60393 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NOBOXO60393 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.18■□□□□ 0.82
NOBOXO60393 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.18■□□□□ 0.82
NOBOXO60393 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.18■□□□□ 0.82
NOBOXO60393 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.18■□□□□ 0.82
NOBOXO60393 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.18■□□□□ 0.82
NOBOXO60393 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
NOBOXO60393 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
NOBOXO60393 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NOBOXO60393 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NOBOXO60393 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NOBOXO60393 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.17■□□□□ 0.82
NOBOXO60393 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.17■□□□□ 0.82
NOBOXO60393 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.17■□□□□ 0.82
NOBOXO60393 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.17■□□□□ 0.82
NOBOXO60393 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.17■□□□□ 0.82
NOBOXO60393 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.17■□□□□ 0.82
NOBOXO60393 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.17■□□□□ 0.82
NOBOXO60393 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NOBOXO60393 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.17■□□□□ 0.82
NOBOXO60393 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.17■□□□□ 0.82
NOBOXO60393 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
NOBOXO60393 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NOBOXO60393 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
NOBOXO60393 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NOBOXO60393 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NOBOXO60393 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.16■□□□□ 0.82
NOBOXO60393 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NOBOXO60393 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NOBOXO60393 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
NOBOXO60393 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.16■□□□□ 0.82
NOBOXO60393 AC007322.3-201ENST00000426526 701 ntBASIC20.16■□□□□ 0.82
NOBOXO60393 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
NOBOXO60393 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.16■□□□□ 0.82
NOBOXO60393 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.16■□□□□ 0.82
NOBOXO60393 AF106564.1-201ENST00000607058 2553 ntBASIC20.16■□□□□ 0.82
NOBOXO60393 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.16■□□□□ 0.82
NOBOXO60393 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NOBOXO60393 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.16■□□□□ 0.82
NOBOXO60393 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.16■□□□□ 0.82
NOBOXO60393 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.15■□□□□ 0.82
NOBOXO60393 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 AL157384.1-201ENST00000445995 2473 ntBASIC20.15■□□□□ 0.82
NOBOXO60393 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 PRORSD1P-201ENST00000295112 541 ntBASIC20.15■□□□□ 0.82
NOBOXO60393 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 MCRIP2P1-201ENST00000394346 511 ntBASIC20.15■□□□□ 0.82
NOBOXO60393 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.15■□□□□ 0.82
NOBOXO60393 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.15■□□□□ 0.82
NOBOXO60393 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.15■□□□□ 0.82
NOBOXO60393 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.15■□□□□ 0.82
NOBOXO60393 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.15■□□□□ 0.82
NOBOXO60393 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NOBOXO60393 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
NOBOXO60393 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
NOBOXO60393 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NOBOXO60393 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.14■□□□□ 0.81
NOBOXO60393 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 KRT18P29-201ENST00000397031 1267 ntBASIC20.14■□□□□ 0.81
NOBOXO60393 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.14■□□□□ 0.81
NOBOXO60393 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NOBOXO60393 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.14■□□□□ 0.81
NOBOXO60393 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms