Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.02■□□□□ 0.8
GDF9O60383 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.02■□□□□ 0.8
GDF9O60383 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.02■□□□□ 0.8
GDF9O60383 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.02■□□□□ 0.8
GDF9O60383 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
GDF9O60383 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GDF9O60383 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GDF9O60383 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.01■□□□□ 0.79
GDF9O60383 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
GDF9O60383 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.01■□□□□ 0.79
GDF9O60383 MIR1238-201ENST00000408483 83 ntBASIC20.01■□□□□ 0.79
GDF9O60383 AL390719.1-204ENST00000412397 1219 ntBASIC20.01■□□□□ 0.79
GDF9O60383 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.01■□□□□ 0.79
GDF9O60383 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.01■□□□□ 0.79
GDF9O60383 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.01■□□□□ 0.79
GDF9O60383 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.01■□□□□ 0.79
GDF9O60383 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.01■□□□□ 0.79
GDF9O60383 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 AC073508.3-201ENST00000619697 1419 ntBASIC20.01■□□□□ 0.79
GDF9O60383 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GDF9O60383 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.01■□□□□ 0.79
GDF9O60383 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
GDF9O60383 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
GDF9O60383 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20■□□□□ 0.79
GDF9O60383 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
GDF9O60383 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20■□□□□ 0.79
GDF9O60383 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20■□□□□ 0.79
GDF9O60383 AL121894.2-201ENST00000602977 491 ntBASIC20■□□□□ 0.79
GDF9O60383 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20■□□□□ 0.79
GDF9O60383 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20■□□□□ 0.79
GDF9O60383 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20■□□□□ 0.79
GDF9O60383 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20■□□□□ 0.79
GDF9O60383 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20■□□□□ 0.79
GDF9O60383 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20■□□□□ 0.79
GDF9O60383 CYP2D8P-201ENST00000433633 1490 ntBASIC19.99■□□□□ 0.79
GDF9O60383 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.99■□□□□ 0.79
GDF9O60383 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
GDF9O60383 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF9O60383 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GDF9O60383 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.99■□□□□ 0.79
GDF9O60383 UNC93B2-201ENST00000285383 730 ntBASIC19.99■□□□□ 0.79
GDF9O60383 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
GDF9O60383 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDF9O60383 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.99■□□□□ 0.79
GDF9O60383 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
GDF9O60383 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.99■□□□□ 0.79
GDF9O60383 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.99■□□□□ 0.79
GDF9O60383 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF9O60383 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GDF9O60383 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF9O60383 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GDF9O60383 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.98■□□□□ 0.79
GDF9O60383 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.98■□□□□ 0.79
GDF9O60383 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.98■□□□□ 0.79
GDF9O60383 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.98■□□□□ 0.79
GDF9O60383 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GDF9O60383 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
GDF9O60383 REXO1L10P-201ENST00000615707 1290 ntBASIC19.98■□□□□ 0.79
GDF9O60383 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
GDF9O60383 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
GDF9O60383 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
GDF9O60383 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
GDF9O60383 AC010542.4-201ENST00000563151 1910 ntBASIC19.98■□□□□ 0.79
GDF9O60383 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GDF9O60383 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GDF9O60383 AC092053.2-201ENST00000640557 1818 ntBASIC19.97■□□□□ 0.79
GDF9O60383 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF9O60383 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF9O60383 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF9O60383 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF9O60383 AL390955.1-201ENST00000428694 934 ntBASIC19.97■□□□□ 0.79
GDF9O60383 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.97■□□□□ 0.79
GDF9O60383 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GDF9O60383 WWOX-216ENST00000569818 525 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms